| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is yjgK [C]
Identifier: 22125539
GI number: 22125539
Start: 1818856
End: 1819083
Strand: Reverse
Name: yjgK [C]
Synonym: y1644
Alternate gene names: 22125539
Gene position: 1819083-1818856 (Counterclockwise)
Preceding gene: 22125543
Following gene: 161484830
Centisome position: 39.54
GC content: 52.63
Gene sequence:
>228_bases GTGATCGGGGCTTCGCCATCAACCCAAGGCCAACGCCCGACGATGGATTTTGATAGTGAGAAAGATTACGGTTTGTTTGA GGGGATGAGTACCGAGACCTTGCTGACGTTAGCACCGGGTGATATTGCCCTACTGTTCCCTGGGGAATTGCATCGCCCGA TGGGGACATTAACAGACCCGGCCCCCATCCGTAAGCTAGTGGTGAAGGTGGCTAATCATCTTTTATGA
Upstream 100 bases:
>100_bases CTTTTGCCAGTAAGAATCCAATACCCTGTGCAGGTATGAGCAACGCCCTGAATTACACCGCTATTACATTGATATTCATA TTCTCTTAGAAGGCAGTGAA
Downstream 100 bases:
>100_bases TGGTTGGTACAGATGACAGATGACAGATGACAGATGACAGATGACAGATGATGATTGTTACAGATGATGATTGGCGTTGA CTTGAACGAATAAACGCTCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 75; Mature: 75
Protein sequence:
>75_residues MIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL
Sequences:
>Translated_75_residues MIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL >Mature_75_residues MIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDPAPIRKLVVKVANHLL
Specific function: Unknown
COG id: COG2731
COG function: function code G; Beta-galactosidase, beta subunit
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 8110; Mature: 8110
Theoretical pI: Translated: 4.90; Mature: 4.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.3 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 5.3 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCC APIRKLVVKVANHLL HHHHHHHHHHHHHCC >Mature Secondary Structure MIGASPSTQGQRPTMDFDSEKDYGLFEGMSTETLLTLAPGDIALLFPGELHRPMGTLTDP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCCCCC APIRKLVVKVANHLL HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA