| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is fadL [H]
Identifier: 22125472
GI number: 22125472
Start: 1743089
End: 1744360
Strand: Reverse
Name: fadL [H]
Synonym: y1577
Alternate gene names: 22125472
Gene position: 1744360-1743089 (Counterclockwise)
Preceding gene: 22125478
Following gene: 22125460
Centisome position: 37.91
GC content: 48.58
Gene sequence:
>1272_bases TTGGTCATGAACCAGAAAAACCTGTTTACCCGCTCAGCTCTGGCAGCAGCTATCGCTCTTATTTCATCGAACGTTTCTGC AGCCGGTTTTCAGTTGAATGAATATTCAGCCGCCGCTCTAGGGCGTGCTTTCTCTGGTGAAGGCGCAGTGGCTGATAATG CTTCCGTTGGTAGCCGCAATCCTGCAGCAATGACTTTATTCGACCGCCCTTCTTTCTCCGGTGGTGTGATTTATATTGAT CCAAGTGTTGATATCACGGGGACGTCGCCAAGTGGCAAAAGTACGGATGCCAGTAACATTGCGCCATCAGCGTGGGTTCC GAATCTCCACTTTATTATGCCATTGGATGAACAGTGGGCAATCGGTGCTTCTGCGACCTCTAACTACGGTTTAGCCACTG AATTTAATGATGATTATGTGGCAGGCATGTTAGGCGGCCAAACCGATCTGAAAACGGCTAACCTCAACCTAAGTGCCGCG TACCGCCTGAATGATAACTTCAGTTTTGGCCTGGGGTTTGATGCAGTCTATGCTGATGCGAAAATTGTGCGCCATCTCGG TGAAGCTGGCGGGGGTCTATTGCCTGCTAACACTGAAGCCGCCAGGTTGGAAGGTACCAAATGGGGTTACGGCTGGAATA CGGGTATTTTGTATGAAATCGATAAAGAAAACCGCTACAGCTTCACTTATCGTTCTGAAGTCAATATCGATTTTGACGGT GATTACAGTAACCAACTACCTGTTATTTTCGGTGGTCTGGGTGGAAAAACGGTCCCTGGTTCCCTAACTCTGAACCTGCC CGCCGTGTGGGAAGTCTCCGGCTACAATAAAGTCGCGCCACAATGGGCCATTCACTACAGCATGGCTTACACCACCTGGA GCAGTTTCAAGGAGTTAAAAGCAACCGCGTCTAATGGCGATGTGCTGTTTGATAAACATGAAGGCTTCAGAGATGCCTAC CGTATTGCGTTAGGGACCACCTATTACTACGATGATAACTGGACATTCCGCACCGGTATTGCCTTTGATGATAGCCCGAT CCCCGCAGGAAACCGTTCAATTTCCATCCCGGACCAAGATCGTTTCTGGCTCAGTGCAGGTACCACCTACGCCTTCAACA AAAATGCCTCTGTTGATGTCGGTATTGCTTATATGAAAAGCCAGAATGTCAGTATTACCGAAAAGACCCCGGCCCCATCT AACACCACATATGAGTTCAACTCGAAAGGTTCCGCGATGCTATACGGTGTGAACTTCAACTACACATTCTAA
Upstream 100 bases:
>100_bases CTTCAGTCACTGGTCTGCTTTGTCTGACCGATAACAGACCCTACAATCCCGCACTTTCTTGTTACGGTATGTAACATAGT TTAAATAAAACAATGAGGTT
Downstream 100 bases:
>100_bases TAGCCAGTCATTCATCACCTTATCCAATAGAAAAGCGCCTGATGGCGCTTTTCTATTTTGAATACGGCGGTGAGTACTGC GCTAGACCAGTTAATATCAA
Product: long-chain fatty acid outer membrane transporter
Products: NA
Alternate protein names: Outer membrane fadL protein; Outer membrane flp protein [H]
Number of amino acids: Translated: 423; Mature: 423
Protein sequence:
>423_residues MVMNQKNLFTRSALAAAIALISSNVSAAGFQLNEYSAAALGRAFSGEGAVADNASVGSRNPAAMTLFDRPSFSGGVIYID PSVDITGTSPSGKSTDASNIAPSAWVPNLHFIMPLDEQWAIGASATSNYGLATEFNDDYVAGMLGGQTDLKTANLNLSAA YRLNDNFSFGLGFDAVYADAKIVRHLGEAGGGLLPANTEAARLEGTKWGYGWNTGILYEIDKENRYSFTYRSEVNIDFDG DYSNQLPVIFGGLGGKTVPGSLTLNLPAVWEVSGYNKVAPQWAIHYSMAYTTWSSFKELKATASNGDVLFDKHEGFRDAY RIALGTTYYYDDNWTFRTGIAFDDSPIPAGNRSISIPDQDRFWLSAGTTYAFNKNASVDVGIAYMKSQNVSITEKTPAPS NTTYEFNSKGSAMLYGVNFNYTF
Sequences:
>Translated_423_residues MVMNQKNLFTRSALAAAIALISSNVSAAGFQLNEYSAAALGRAFSGEGAVADNASVGSRNPAAMTLFDRPSFSGGVIYID PSVDITGTSPSGKSTDASNIAPSAWVPNLHFIMPLDEQWAIGASATSNYGLATEFNDDYVAGMLGGQTDLKTANLNLSAA YRLNDNFSFGLGFDAVYADAKIVRHLGEAGGGLLPANTEAARLEGTKWGYGWNTGILYEIDKENRYSFTYRSEVNIDFDG DYSNQLPVIFGGLGGKTVPGSLTLNLPAVWEVSGYNKVAPQWAIHYSMAYTTWSSFKELKATASNGDVLFDKHEGFRDAY RIALGTTYYYDDNWTFRTGIAFDDSPIPAGNRSISIPDQDRFWLSAGTTYAFNKNASVDVGIAYMKSQNVSITEKTPAPS NTTYEFNSKGSAMLYGVNFNYTF >Mature_423_residues MVMNQKNLFTRSALAAAIALISSNVSAAGFQLNEYSAAALGRAFSGEGAVADNASVGSRNPAAMTLFDRPSFSGGVIYID PSVDITGTSPSGKSTDASNIAPSAWVPNLHFIMPLDEQWAIGASATSNYGLATEFNDDYVAGMLGGQTDLKTANLNLSAA YRLNDNFSFGLGFDAVYADAKIVRHLGEAGGGLLPANTEAARLEGTKWGYGWNTGILYEIDKENRYSFTYRSEVNIDFDG DYSNQLPVIFGGLGGKTVPGSLTLNLPAVWEVSGYNKVAPQWAIHYSMAYTTWSSFKELKATASNGDVLFDKHEGFRDAY RIALGTTYYYDDNWTFRTGIAFDDSPIPAGNRSISIPDQDRFWLSAGTTYAFNKNASVDVGIAYMKSQNVSITEKTPAPS NTTYEFNSKGSAMLYGVNFNYTF
Specific function: Involved in translocation of long-chain fatty acids across the outer membrane. FadL may form a specific channel [H]
COG id: COG2067
COG function: function code I; Long-chain fatty acid transport protein
Gene ontology:
Cell location: Cell outer membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ompP1/fadL family [H]
Homologues:
Organism=Escherichia coli, GI145693163, Length=453, Percent_Identity=63.355408388521, Blast_Score=569, Evalue=1e-163,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011250 - InterPro: IPR001702 - InterPro: IPR005017 [H]
Pfam domain/function: PF03349 Toluene_X [H]
EC number: NA
Molecular weight: Translated: 45699; Mature: 45699
Theoretical pI: Translated: 4.60; Mature: 4.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVMNQKNLFTRSALAAAIALISSNVSAAGFQLNEYSAAALGRAFSGEGAVADNASVGSRN CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCEECCCCCCCCCCCCCCCC PAAMTLFDRPSFSGGVIYIDPSVDITGTSPSGKSTDASNIAPSAWVPNLHFIMPLDEQWA CCEEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE IGASATSNYGLATEFNDDYVAGMLGGQTDLKTANLNLSAAYRLNDNFSFGLGFDAVYADA ECCCCCCCCCEEEECCCCEEEEECCCCCCEEEECCEEEEEEEECCCEEEECCCHHHHHHH KIVRHLGEAGGGLLPANTEAARLEGTKWGYGWNTGILYEIDKENRYSFTYRSEVNIDFDG HHHHHHHHHCCCCCCCCCCHHEECCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECC DYSNQLPVIFGGLGGKTVPGSLTLNLPAVWEVSGYNKVAPQWAIHYSMAYTTWSSFKELK CCCCCCCEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHH ATASNGDVLFDKHEGFRDAYRIALGTTYYYDDNWTFRTGIAFDDSPIPAGNRSISIPDQD HCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCCEEECCCCC RFWLSAGTTYAFNKNASVDVGIAYMKSQNVSITEKTPAPSNTTYEFNSKGSAMLYGVNFN CEEEECCCEEEECCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEECCCCCEEEEEEEEE YTF EEC >Mature Secondary Structure MVMNQKNLFTRSALAAAIALISSNVSAAGFQLNEYSAAALGRAFSGEGAVADNASVGSRN CCCCCCCCHHHHHHHHHHHHHHCCCCCCCEEECCCHHHHHCCEECCCCCCCCCCCCCCCC PAAMTLFDRPSFSGGVIYIDPSVDITGTSPSGKSTDASNIAPSAWVPNLHFIMPLDEQWA CCEEEEEECCCCCCCEEEECCCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE IGASATSNYGLATEFNDDYVAGMLGGQTDLKTANLNLSAAYRLNDNFSFGLGFDAVYADA ECCCCCCCCCEEEECCCCEEEEECCCCCCEEEECCEEEEEEEECCCEEEECCCHHHHHHH KIVRHLGEAGGGLLPANTEAARLEGTKWGYGWNTGILYEIDKENRYSFTYRSEVNIDFDG HHHHHHHHHCCCCCCCCCCHHEECCCCCCCCCCCCEEEEECCCCCEEEEEEEEEEEEECC DYSNQLPVIFGGLGGKTVPGSLTLNLPAVWEVSGYNKVAPQWAIHYSMAYTTWSSFKELK CCCCCCCEEEECCCCCCCCCEEEEECCEEEEECCCCCCCCCEEEEEEEEEHHHHHHHHHH ATASNGDVLFDKHEGFRDAYRIALGTTYYYDDNWTFRTGIAFDDSPIPAGNRSISIPDQD HCCCCCCEEEECCCCCCCEEEEEEEEEEEECCCEEEEEEEEECCCCCCCCCCEEECCCCC RFWLSAGTTYAFNKNASVDVGIAYMKSQNVSITEKTPAPSNTTYEFNSKGSAMLYGVNFN CEEEECCCEEEECCCCCEEEEEEEEECCCCEEEECCCCCCCCEEEECCCCCEEEEEEEEE YTF EEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]