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The map label for this gene is dmsC [H]

Identifier: 22125414

GI number: 22125414

Start: 1678005

End: 1678838

Strand: Reverse

Name: dmsC [H]

Synonym: y1517

Alternate gene names: 22125414

Gene position: 1678838-1678005 (Counterclockwise)

Preceding gene: 22125415

Following gene: 22125413

Centisome position: 36.49

GC content: 50.48

Gene sequence:

>834_bases
ATGCAAAACCATCCGGTGATACATCAGGCCGCATCCAAAACCCGGCGGAGGTATAAAATGCATGAATTACCTTTAGTATT
TTTTACCGTGCTCGGGCAGACCGCCGTCGGGCTGTTTACACTGGCGTGGCTCAGTAACAAGCTAGGGATGACCACGCCGC
TGCAACTGAAGCAGGCCAATATTGTTGGGCTGATTCTGGTGATGGCCGGCCTGTTAATTGGCACCCTGCATGTTGGGCAA
CCTCTGCGGGCGATAAATATGTTACTGGGTGTTGGCCGTTCGCCAATGAGTAATGAAATTCTGCTCAGTGGCCTGTTTGT
TGCTATGGCTTGCGGCACGGTATTCTTTTCGACTCTGGTGAAAAATTCGCTACTGGCGGCGCTGTGTAATTTTGCCACTG
TTCTGGTTGGTCTGACTTTTGCTTGGTCAATAACTCAAGTCTATCAACTGACCACGGTCCCTAATTGGGATACGTCATAT
ACCTCATTGCAACTTTGGATGACGGTATTGGTTGGCGGTGGGGCTTTCGCTATGTTAACCGGGGCGCGTCAACTTGGTGC
CATAGCATTGCTAGCCGGTGCCATTGTGACCTTGGTGAATAAACCGGGTTATTTAACTTTCCTCGGGCAAGGCTCGGCGG
AATTGAGTAGCCAGCAGACCCTCTTCTGGGGAATTCAGATCCTGCTGTTGGTATTAGGCGTTTTTGTGGCCGCTGCGGCG
TTACTGAAAGACAAAATCCCACGGGCAACACTGGCAGTGTGTGCATCAGCGCTTATCATCGGTGAATTAGCCGGGCGGAT
TGCCTTTTATAATCTCTGGCAAATACCAATGTGA

Upstream 100 bases:

>100_bases
ATCTCGGTGTTACGTGATAAATACGGTGACGAAAATGCAATTGCACCGTTACCCCATGCGCATCTGACACAGCCTAATCT
CGTGATTCGTGGCCACCGCG

Downstream 100 bases:

>100_bases
TTTAATGCGTTGATTTATCATTCCATGTGGTGATTTACCCGCTGATTAGCGGCTATTTTTGCGGCTAATCAGCCCCCGAA
TAACGTTATATCCTAAATAA

Product: membrane anchor protein for oxidoreductase

Products: NA

Alternate protein names: DMSO reductase anchor subunit [H]

Number of amino acids: Translated: 277; Mature: 277

Protein sequence:

>277_residues
MQNHPVIHQAASKTRRRYKMHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVGQ
PLRAINMLLGVGRSPMSNEILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLTFAWSITQVYQLTTVPNWDTSY
TSLQLWMTVLVGGGAFAMLTGARQLGAIALLAGAIVTLVNKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAA
LLKDKIPRATLAVCASALIIGELAGRIAFYNLWQIPM

Sequences:

>Translated_277_residues
MQNHPVIHQAASKTRRRYKMHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVGQ
PLRAINMLLGVGRSPMSNEILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLTFAWSITQVYQLTTVPNWDTSY
TSLQLWMTVLVGGGAFAMLTGARQLGAIALLAGAIVTLVNKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAA
LLKDKIPRATLAVCASALIIGELAGRIAFYNLWQIPM
>Mature_277_residues
MQNHPVIHQAASKTRRRYKMHELPLVFFTVLGQTAVGLFTLAWLSNKLGMTTPLQLKQANIVGLILVMAGLLIGTLHVGQ
PLRAINMLLGVGRSPMSNEILLSGLFVAMACGTVFFSTLVKNSLLAALCNFATVLVGLTFAWSITQVYQLTTVPNWDTSY
TSLQLWMTVLVGGGAFAMLTGARQLGAIALLAGAIVTLVNKPGYLTFLGQGSAELSSQQTLFWGIQILLLVLGVFVAAAA
LLKDKIPRATLAVCASALIIGELAGRIAFYNLWQIPM

Specific function: Terminal reductase during anaerobic growth on various sulfoxide and N-oxide compounds. DmsC anchors the dmsAB dimer to the membrane and stabilizes it [H]

COG id: COG3302

COG function: function code R; DMSO reductase anchor subunit

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1787873, Length=163, Percent_Identity=34.9693251533742, Blast_Score=81, Evalue=6e-17,
Organism=Escherichia coli, GI1787123, Length=285, Percent_Identity=29.8245614035088, Blast_Score=71, Evalue=7e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007059 [H]

Pfam domain/function: PF04976 DmsC [H]

EC number: NA

Molecular weight: Translated: 29702; Mature: 29702

Theoretical pI: Translated: 10.46; Mature: 10.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC
>Mature Secondary Structure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HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 7542800; 8635740 [H]