| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ypeC [C]
Identifier: 22125398
GI number: 22125398
Start: 1665360
End: 1665710
Strand: Reverse
Name: ypeC [C]
Synonym: y1501
Alternate gene names: 22125398
Gene position: 1665710-1665360 (Counterclockwise)
Preceding gene: 22125399
Following gene: 22125396
Centisome position: 36.21
GC content: 47.01
Gene sequence:
>351_bases TTGGTCACGATACTCGCCTGGTTACCGTTAACCCCGATGGCGAATGCGGAAAGCATTGAATTGTTACCCAGTATTTCTTT GCAAATTGGTGAACAAGATCGTCGTGGTAATTATTGGGATGGCTATGATTGGCGCGATCGCCAATGGTGGCTGAACCATC AAGGACGAAATTTAGGTGAACGTAACCGCAATGGGCATTACTGGGATGGCCGCCGCTGGCAAGACAGGGGATGGTGGAAG AAAAATTATTACTACCGTGAAGGCCGTTACTGGAAATACGACAAGCATGGCAATAAGCATGGTCAAAAACATCACAACAA GAAAGGGCGAGGTCATCGTCATGATGACTAA
Upstream 100 bases:
>100_bases ATGACCTCATGCCAATAAGGCCGAGCAAGGATAAGAGATGTTAAATACGGGTGTTTTTAAACCAACAATATTAAAACCAA TGATGTTAAAACCGTTATTA
Downstream 100 bases:
>100_bases ATAGACATTGTCATCGCTCAATAAAGCCTGTCAGGCGGGTTTTCATGGAATTATTATCGGATCGACACGCCTGACAACGT TCATTATTAAGTCTAAAGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 116; Mature: 116
Protein sequence:
>116_residues MVTILAWLPLTPMANAESIELLPSISLQIGEQDRRGNYWDGYDWRDRQWWLNHQGRNLGERNRNGHYWDGRRWQDRGWWK KNYYYREGRYWKYDKHGNKHGQKHHNKKGRGHRHDD
Sequences:
>Translated_116_residues MVTILAWLPLTPMANAESIELLPSISLQIGEQDRRGNYWDGYDWRDRQWWLNHQGRNLGERNRNGHYWDGRRWQDRGWWK KNYYYREGRYWKYDKHGNKHGQKHHNKKGRGHRHDD >Mature_116_residues MVTILAWLPLTPMANAESIELLPSISLQIGEQDRRGNYWDGYDWRDRQWWLNHQGRNLGERNRNGHYWDGRRWQDRGWWK KNYYYREGRYWKYDKHGNKHGQKHHNKKGRGHRHDD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1788734, Length=119, Percent_Identity=42.8571428571429, Blast_Score=60, Evalue=5e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14401; Mature: 14401
Theoretical pI: Translated: 10.31; Mature: 10.31
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVTILAWLPLTPMANAESIELLPSISLQIGEQDRRGNYWDGYDWRDRQWWLNHQGRNLGE CEEEEEECCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC RNRNGHYWDGRRWQDRGWWKKNYYYREGRYWKYDKHGNKHGQKHHNKKGRGHRHDD CCCCCCCCCCCEECCCCCCCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MVTILAWLPLTPMANAESIELLPSISLQIGEQDRRGNYWDGYDWRDRQWWLNHQGRNLGE CEEEEEECCCCCCCCCCCEEECCCCEEEECCCCCCCCCCCCCCCCCCEEEECCCCCCCCC RNRNGHYWDGRRWQDRGWWKKNYYYREGRYWKYDKHGNKHGQKHHNKKGRGHRHDD CCCCCCCCCCCEECCCCCCCCCCEECCCCEEECCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA