| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is zipA [H]
Identifier: 22125388
GI number: 22125388
Start: 1653841
End: 1654866
Strand: Direct
Name: zipA [H]
Synonym: y1491
Alternate gene names: 22125388
Gene position: 1653841-1654866 (Clockwise)
Preceding gene: 22125381
Following gene: 22125389
Centisome position: 35.95
GC content: 49.12
Gene sequence:
>1026_bases TTGCCGCGGTGGCAATGTATTGGAACAACAGAGATAGTAATGATGCAGGATTTGCGTCTGATATTAATCGTTGTTGGCGC GATCGCCATAATAGCGTTGTTATTGCATGGTTTGTGGACCAGCCGTAAAGAGCGCTCTTCACTTTTTCGCGATCGCCCAG TTAAACGTACAAAACAAGAACGTGTTGAAACCCCGATCGAGAGTCTCGATGAAGGGGTAGGAGAAGTGCGCGTCCGCACG TCTCACCCACAAGAGAAGCCTTCATTTAATCATCTTGACGATGATGACGATGAAGTGCCGGTTATTCAGCATGCTGAAAC AAAATCGGCTCAGGTTAAGACAGCATCTCGTCAGGCGCCTTTTGCTTCAGTACAAACAGATTATGACGACCCGCTTTTGG GTGGGCTATCTGCTGAACAACCACCGCATGACTTATCGCGTGATCCTTTGCTTGGCAAGGCTGATGAATCTTATTCACAG CCGCAACACGCAGAGCCACCGCATGTGGAAAAACCTGCACATCAGGTGGCTCCACAACAGCATGTGGAATCTCAGCAAGA GCCCGTCGCTCCAGCACCCGAAGCGAAACCACAAAAGCTAAAAGAAACTGTTTTGGTGCTGCACGTCGCAGCGCATCACG GTGGTGTGATCGGTGGTGAGGTACTACTGCAAAGTGTTCTTCAATCTGGTTTCCAGTTCGGCGAGATGGGTATTTTCCAT CGTCATCTTAGCCCTGCAGGCAGCGGACCGGTCTTATTCAGTCTGGCGAATATGGTAAAACCAGGTTCGTTTGACCCTGA CACCATGTCTGATTTTTCAACGCCCGGTGTTTCAATGTTTATGATGGTACCGTCATACGGCGATGCGAATCAGAACTTTA AGTTAATGCTGCAATCAGCCCAACGTATTGCCGACGATGTCGGTGGTGTGGTGTTAGATGATGAACGCCGCATGATGACC CCGCAGAAATTGGAATCATATAAGGCGCGTATCCGTGAAGTGCTGGATGCGAATACAATTGCTTGA
Upstream 100 bases:
>100_bases AAATTAAGCGAAACACCTAGCATAATCATCTTTCTTCGAAGAAAATTGAGCACGGACTTGCACTTGTGTTCGTTGGGAAA TAGAGTTAAAGGGTGAATGT
Downstream 100 bases:
>100_bases TAATCTTTTTTATAAAGCGATTGCCTCGTAATAAATCGAATTAACCCGAACCCCCGCATGCCGGGGGTTTTTTATCTTTG GTGATGAGCTATGGAATCGA
Product: cell division protein ZipA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 341; Mature: 340
Protein sequence:
>341_residues MPRWQCIGTTEIVMMQDLRLILIVVGAIAIIALLLHGLWTSRKERSSLFRDRPVKRTKQERVETPIESLDEGVGEVRVRT SHPQEKPSFNHLDDDDDEVPVIQHAETKSAQVKTASRQAPFASVQTDYDDPLLGGLSAEQPPHDLSRDPLLGKADESYSQ PQHAEPPHVEKPAHQVAPQQHVESQQEPVAPAPEAKPQKLKETVLVLHVAAHHGGVIGGEVLLQSVLQSGFQFGEMGIFH RHLSPAGSGPVLFSLANMVKPGSFDPDTMSDFSTPGVSMFMMVPSYGDANQNFKLMLQSAQRIADDVGGVVLDDERRMMT PQKLESYKARIREVLDANTIA
Sequences:
>Translated_341_residues MPRWQCIGTTEIVMMQDLRLILIVVGAIAIIALLLHGLWTSRKERSSLFRDRPVKRTKQERVETPIESLDEGVGEVRVRT SHPQEKPSFNHLDDDDDEVPVIQHAETKSAQVKTASRQAPFASVQTDYDDPLLGGLSAEQPPHDLSRDPLLGKADESYSQ PQHAEPPHVEKPAHQVAPQQHVESQQEPVAPAPEAKPQKLKETVLVLHVAAHHGGVIGGEVLLQSVLQSGFQFGEMGIFH RHLSPAGSGPVLFSLANMVKPGSFDPDTMSDFSTPGVSMFMMVPSYGDANQNFKLMLQSAQRIADDVGGVVLDDERRMMT PQKLESYKARIREVLDANTIA >Mature_340_residues PRWQCIGTTEIVMMQDLRLILIVVGAIAIIALLLHGLWTSRKERSSLFRDRPVKRTKQERVETPIESLDEGVGEVRVRTS HPQEKPSFNHLDDDDDEVPVIQHAETKSAQVKTASRQAPFASVQTDYDDPLLGGLSAEQPPHDLSRDPLLGKADESYSQP QHAEPPHVEKPAHQVAPQQHVESQQEPVAPAPEAKPQKLKETVLVLHVAAHHGGVIGGEVLLQSVLQSGFQFGEMGIFHR HLSPAGSGPVLFSLANMVKPGSFDPDTMSDFSTPGVSMFMMVPSYGDANQNFKLMLQSAQRIADDVGGVVLDDERRMMTP QKLESYKARIREVLDANTIA
Specific function: Interacts directly with the cell division protein FtsZ. Probable receptor for the septal ring structure, may anchor it to the inner-membrane [H]
COG id: COG3115
COG function: function code D; Cell division protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass type I membrane protein [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the ZipA family [H]
Homologues:
Organism=Escherichia coli, GI1788752, Length=367, Percent_Identity=50.1362397820163, Blast_Score=265, Evalue=3e-72,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011919 - InterPro: IPR007449 - ProDom: PD035754 [H]
Pfam domain/function: PF04354 ZipA_C [H]
EC number: NA
Molecular weight: Translated: 37614; Mature: 37483
Theoretical pI: Translated: 5.70; Mature: 5.70
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRWQCIGTTEIVMMQDLRLILIVVGAIAIIALLLHGLWTSRKERSSLFRDRPVKRTKQE CCCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH RVETPIESLDEGVGEVRVRTSHPQEKPSFNHLDDDDDEVPVIQHAETKSAQVKTASRQAP HHHCHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCC FASVQTDYDDPLLGGLSAEQPPHDLSRDPLLGKADESYSQPQHAEPPHVEKPAHQVAPQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCHH HVESQQEPVAPAPEAKPQKLKETVLVLHVAAHHGGVIGGEVLLQSVLQSGFQFGEMGIFH HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH RHLSPAGSGPVLFSLANMVKPGSFDPDTMSDFSTPGVSMFMMVPSYGDANQNFKLMLQSA HHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHH QRIADDVGGVVLDDERRMMTPQKLESYKARIREVLDANTIA HHHHHHHCCEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure PRWQCIGTTEIVMMQDLRLILIVVGAIAIIALLLHGLWTSRKERSSLFRDRPVKRTKQE CCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHH RVETPIESLDEGVGEVRVRTSHPQEKPSFNHLDDDDDEVPVIQHAETKSAQVKTASRQAP HHHCHHHHHHCCHHHEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHCCCC FASVQTDYDDPLLGGLSAEQPPHDLSRDPLLGKADESYSQPQHAEPPHVEKPAHQVAPQQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCHHHCCCHH HVESQQEPVAPAPEAKPQKLKETVLVLHVAAHHGGVIGGEVLLQSVLQSGFQFGEMGIFH HHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHH RHLSPAGSGPVLFSLANMVKPGSFDPDTMSDFSTPGVSMFMMVPSYGDANQNFKLMLQSA HHCCCCCCCHHHHHHHHHCCCCCCCCCCHHHCCCCCCEEEEEECCCCCCCCHHHHHHHHH QRIADDVGGVVLDDERRMMTPQKLESYKARIREVLDANTIA HHHHHHHCCEEECCCHHHCCHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA