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The map label for this gene is nudK [H]

Identifier: 22125345

GI number: 22125345

Start: 1604938

End: 1605561

Strand: Direct

Name: nudK [H]

Synonym: y1448

Alternate gene names: 22125345

Gene position: 1604938-1605561 (Clockwise)

Preceding gene: 22125344

Following gene: 22125346

Centisome position: 34.88

GC content: 46.79

Gene sequence:

>624_bases
ATGATTATCAGGGCCAAAGAAGAGTCTATGTCTGTCAAAATTGAAAATATACAGTGTGAATTGTTATCAAAGAACTGGTT
TAAATTACACAAATACACCTTTGATTTAAAAACAGATGAGGGAACCTCGGTACAACAAATCCGTGAAGTCTATGACCGGG
GGAACGGTGCGACTATCTTGTTGTATAACCGCCAACAGGGCACGGTGGTGTTGATCGAACAATTCCGGATGCCAACCTAT
GTTAACGGCAATGCCAGCGGTATGTTGCTGGAGGCGTGTGCCGGTTTACTGGATAACGATTCGCCAGAGGCGTGTATCCG
CCGTGAAGCGATGGAAGAAACGGGTTATCAGGTTGATAAAGTACAAAAGCTGTTCGAGGCTTATATGTCGCCGGGGGGGG
TGACTGAGCTGGTCTATTTCTTTGCGGCTGAATATCACCCAGATCAAAAGATAACCGATGAGGTTGGGGTAGAGGACGAG
GTCATTGAAGTCGTCGAATTGCCGTTCCACGATGCTCTCGCGATGGTCGCAGATGGGCGAATTAAAGATGGTAAGACGAT
TATGTTGTTGCAGTATGCGCAGATTCATTTTTTCCCTTCGTCCTTGACGCCACAGCGGTGTTAG

Upstream 100 bases:

>100_bases
CGGAGAGTGATGATTAACGCCCTGTGGACTTTGCGTCGGCAGGGCGTTTTTACTGCAGCAGGAAAAAGTATCGCAGTGAG
GTGTATGCTAGATTACGTTA

Downstream 100 bases:

>100_bases
CTGCGCTCATTTACCCGAATCGCCTTTCCCCTGCTTTTATATCTTATTGATCAATAAAACGTCAGTTAATAAAAATGTTA
CGCAGAGTATGGGCTGGTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 207

Protein sequence:

>207_residues
MIIRAKEESMSVKIENIQCELLSKNWFKLHKYTFDLKTDEGTSVQQIREVYDRGNGATILLYNRQQGTVVLIEQFRMPTY
VNGNASGMLLEACAGLLDNDSPEACIRREAMEETGYQVDKVQKLFEAYMSPGGVTELVYFFAAEYHPDQKITDEVGVEDE
VIEVVELPFHDALAMVADGRIKDGKTIMLLQYAQIHFFPSSLTPQRC

Sequences:

>Translated_207_residues
MIIRAKEESMSVKIENIQCELLSKNWFKLHKYTFDLKTDEGTSVQQIREVYDRGNGATILLYNRQQGTVVLIEQFRMPTY
VNGNASGMLLEACAGLLDNDSPEACIRREAMEETGYQVDKVQKLFEAYMSPGGVTELVYFFAAEYHPDQKITDEVGVEDE
VIEVVELPFHDALAMVADGRIKDGKTIMLLQYAQIHFFPSSLTPQRC
>Mature_207_residues
MIIRAKEESMSVKIENIQCELLSKNWFKLHKYTFDLKTDEGTSVQQIREVYDRGNGATILLYNRQQGTVVLIEQFRMPTY
VNGNASGMLLEACAGLLDNDSPEACIRREAMEETGYQVDKVQKLFEAYMSPGGVTELVYFFAAEYHPDQKITDEVGVEDE
VIEVVELPFHDALAMVADGRIKDGKTIMLLQYAQIHFFPSSLTPQRC

Specific function: Catalyzes the hydrolysis of GDP-mannose [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

Organism=Escherichia coli, GI1788810, Length=185, Percent_Identity=61.0810810810811, Blast_Score=238, Evalue=2e-64,
Organism=Escherichia coli, GI1789412, Length=190, Percent_Identity=30.5263157894737, Blast_Score=82, Evalue=3e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004385
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 23530; Mature: 23530

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
5.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIIRAKEESMSVKIENIQCELLSKNWFKLHKYTFDLKTDEGTSVQQIREVYDRGNGATIL
CEEECCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEE
LYNRQQGTVVLIEQFRMPTYVNGNASGMLLEACAGLLDNDSPEACIRREAMEETGYQVDK
EEECCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
VQKLFEAYMSPGGVTELVYFFAAEYHPDQKITDEVGVEDEVIEVVELPFHDALAMVADGR
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHCCC
IKDGKTIMLLQYAQIHFFPSSLTPQRC
CCCCCEEEEEEEEEEEEECCCCCCCCC
>Mature Secondary Structure
MIIRAKEESMSVKIENIQCELLSKNWFKLHKYTFDLKTDEGTSVQQIREVYDRGNGATIL
CEEECCCCCCEEEEEEEEEEEECCCCEEEEEEEEEEECCCCCCHHHHHHHHHCCCCCEEE
LYNRQQGTVVLIEQFRMPTYVNGNASGMLLEACAGLLDNDSPEACIRREAMEETGYQVDK
EEECCCCCEEEEEECCCCEEECCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHH
VQKLFEAYMSPGGVTELVYFFAAEYHPDQKITDEVGVEDEVIEVVELPFHDALAMVADGR
HHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHCCCCHHHHHHHHCCHHHHHHHHHCCC
IKDGKTIMLLQYAQIHFFPSSLTPQRC
CCCCCEEEEEEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA