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The map label for this gene is ydeM [H]

Identifier: 22125333

GI number: 22125333

Start: 1591464

End: 1592651

Strand: Direct

Name: ydeM [H]

Synonym: y1436

Alternate gene names: 22125333

Gene position: 1591464-1592651 (Clockwise)

Preceding gene: 22125332

Following gene: 22125338

Centisome position: 34.59

GC content: 39.23

Gene sequence:

>1188_bases
ATGAGGAAAACTATGCATATCACGGCTAAACCAACCAGCTACCAGTGTAATTTAAAGTGTGATTACTGCTTTTATCTCAG
TAAAGAAAACATTTTTCAGCACAAAGGTTGGATGACTGAAGAAACCCTTGAAACATTTATCGAGCGATATATCAGTGCAT
CGGGGCATGATGTGTATTTCACTTGGCAAGGGGGTGAGCCTACCATGGCTGGGCTGGATTTCTTTGAGAAAGCGATACAG
TATCAGAACCGCTATAAAGGGACTAAAAAAATACACAACGCTTTACAAACTAACGGTATTTTATTAGATGATGCATGGTG
TCTCTTTCTAAGAGAAAATCATTTTTTAGTCGGTGTGTCTATTGATGGCCCTAAAGAGTTACACGATCGCTACCGTGTGA
CTCGCTCAGGCAAAGGATCGTTTGATAAAGTGATGGCAGGTATTGAGCAACTCAAAAAACATCAGGTAGAGTTTAATACA
TTAACCGTGATAAATCGTATCAATGTAAAATACCCCCTTGAAGTTTATCGAACGTTAAAATCTATCGGTGCTAAACATAT
CCAATTTATTGAACTGTTGGAAACAACCGAGCCTAATATTGATTTTTCAAATCAAAAAAGCACGTTTGAACTTATTGAGT
TCACTGTCCCTGCGGTTGATTATGGCCATTTCATGGCGGAGGTCTTCAAAGAATGGGTTCGCCATGATGTAGGAACTCTC
TTTATTCGCCAGTTTGAGTCTTTTGTCAGCCGATTTATTGGCAATGGGCACACGAGCTGTGTTTTCCAAAAATCGTGCAA
AAATAATTTTGTGATGGAGTCCAATGGTGACATTTATGAATGTGATCACTTTGTCTACCCTGAGTATAAAATAGGCAATA
TTTACCACGATAAATTGGATTCGTTGGCGAGCGATAAATTATCCGCGCAAAAAGAGGTGCTATCTGAGTCATGCCGTAAG
TGTATGTATAAAGCCATTTGCTATGGCGGTTGCCCAAAACATAGGATTGATCAGGACAGCGATGGGATGAAATCCTATTT
TTGCGCAGGGTATAAAATACTCTTCTCGGTTATGGTGCCTTATATGAATGCGCTGGCTGAATTAGAAAAAAATGGTATTC
CATTGGATAAGATCATGGGTATCGTCGATGACATTGAATGTGGAATAAAATCACAACAGCAGCATTAA

Upstream 100 bases:

>100_bases
TGAAGTTAATCAGGATAAATTTAATAAAATTAAGCAATCGCTTGGTATGAATTAAGCCGCCAAAGGCGGCAAGTATTTTT
CTTGCCGTCTGTCTATCTCC

Downstream 100 bases:

>100_bases
TTATGGTCATTGACCTACAAGATAGAGGCTCACTAATATAAAAGATGGCGTATTAGTGAGCGAACACGGGGTCCAAGCTA
ATTGGTATTGTTACAAACAG

Product: enzyme

Products: NA

Alternate protein names: AnSME homolog [H]

Number of amino acids: Translated: 395; Mature: 395

Protein sequence:

>395_residues
MRKTMHITAKPTSYQCNLKCDYCFYLSKENIFQHKGWMTEETLETFIERYISASGHDVYFTWQGGEPTMAGLDFFEKAIQ
YQNRYKGTKKIHNALQTNGILLDDAWCLFLRENHFLVGVSIDGPKELHDRYRVTRSGKGSFDKVMAGIEQLKKHQVEFNT
LTVINRINVKYPLEVYRTLKSIGAKHIQFIELLETTEPNIDFSNQKSTFELIEFTVPAVDYGHFMAEVFKEWVRHDVGTL
FIRQFESFVSRFIGNGHTSCVFQKSCKNNFVMESNGDIYECDHFVYPEYKIGNIYHDKLDSLASDKLSAQKEVLSESCRK
CMYKAICYGGCPKHRIDQDSDGMKSYFCAGYKILFSVMVPYMNALAELEKNGIPLDKIMGIVDDIECGIKSQQQH

Sequences:

>Translated_395_residues
MRKTMHITAKPTSYQCNLKCDYCFYLSKENIFQHKGWMTEETLETFIERYISASGHDVYFTWQGGEPTMAGLDFFEKAIQ
YQNRYKGTKKIHNALQTNGILLDDAWCLFLRENHFLVGVSIDGPKELHDRYRVTRSGKGSFDKVMAGIEQLKKHQVEFNT
LTVINRINVKYPLEVYRTLKSIGAKHIQFIELLETTEPNIDFSNQKSTFELIEFTVPAVDYGHFMAEVFKEWVRHDVGTL
FIRQFESFVSRFIGNGHTSCVFQKSCKNNFVMESNGDIYECDHFVYPEYKIGNIYHDKLDSLASDKLSAQKEVLSESCRK
CMYKAICYGGCPKHRIDQDSDGMKSYFCAGYKILFSVMVPYMNALAELEKNGIPLDKIMGIVDDIECGIKSQQQH
>Mature_395_residues
MRKTMHITAKPTSYQCNLKCDYCFYLSKENIFQHKGWMTEETLETFIERYISASGHDVYFTWQGGEPTMAGLDFFEKAIQ
YQNRYKGTKKIHNALQTNGILLDDAWCLFLRENHFLVGVSIDGPKELHDRYRVTRSGKGSFDKVMAGIEQLKKHQVEFNT
LTVINRINVKYPLEVYRTLKSIGAKHIQFIELLETTEPNIDFSNQKSTFELIEFTVPAVDYGHFMAEVFKEWVRHDVGTL
FIRQFESFVSRFIGNGHTSCVFQKSCKNNFVMESNGDIYECDHFVYPEYKIGNIYHDKLDSLASDKLSAQKEVLSESCRK
CMYKAICYGGCPKHRIDQDSDGMKSYFCAGYKILFSVMVPYMNALAELEKNGIPLDKIMGIVDDIECGIKSQQQH

Specific function: Unknown

COG id: COG0641

COG function: function code R; Arylsulfatase regulator (Fe-S oxidoreductase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the radical SAM superfamily. Anaerobic sulfatase-maturating enzyme family [H]

Homologues:

Organism=Escherichia coli, GI87081923, Length=383, Percent_Identity=65.7963446475196, Blast_Score=554, Evalue=1e-159,
Organism=Escherichia coli, GI48994973, Length=395, Percent_Identity=40, Blast_Score=330, Evalue=7e-92,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007197 [H]

Pfam domain/function: PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45696; Mature: 45696

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
6.3 %Cys+Met (Translated Protein)
3.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
6.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKTMHITAKPTSYQCNLKCDYCFYLSKENIFQHKGWMTEETLETFIERYISASGHDVYF
CCCEEEEEECCCCEEEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEEEE
TWQGGEPTMAGLDFFEKAIQYQNRYKGTKKIHNALQTNGILLDDAWCLFLRENHFLVGVS
EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCEEEEEECCEEEEEEE
IDGPKELHDRYRVTRSGKGSFDKVMAGIEQLKKHQVEFNTLTVINRINVKYPLEVYRTLK
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHH
SIGAKHIQFIELLETTEPNIDFSNQKSTFELIEFTVPAVDYGHFMAEVFKEWVRHDVGTL
HHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
FIRQFESFVSRFIGNGHTSCVFQKSCKNNFVMESNGDIYECDHFVYPEYKIGNIYHDKLD
HHHHHHHHHHHHHCCCCCHHEEHHHHCCCEEEECCCCEEECCCEECCCEEECCCHHHHHH
SLASDKLSAQKEVLSESCRKCMYKAICYGGCPKHRIDQDSDGMKSYFCAGYKILFSVMVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YMNALAELEKNGIPLDKIMGIVDDIECGIKSQQQH
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKTMHITAKPTSYQCNLKCDYCFYLSKENIFQHKGWMTEETLETFIERYISASGHDVYF
CCCEEEEEECCCCEEEEEEEEEEEEECCCCHHHHCCCCCHHHHHHHHHHHHCCCCCEEEE
TWQGGEPTMAGLDFFEKAIQYQNRYKGTKKIHNALQTNGILLDDAWCLFLRENHFLVGVS
EEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCEEEECCEEEEEECCEEEEEEE
IDGPKELHDRYRVTRSGKGSFDKVMAGIEQLKKHQVEFNTLTVINRINVKYPLEVYRTLK
CCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCHHEEEEEEECCCCCCHHHHHHHH
SIGAKHIQFIELLETTEPNIDFSNQKSTFELIEFTVPAVDYGHFMAEVFKEWVRHDVGTL
HHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHH
FIRQFESFVSRFIGNGHTSCVFQKSCKNNFVMESNGDIYECDHFVYPEYKIGNIYHDKLD
HHHHHHHHHHHHHCCCCCHHEEHHHHCCCEEEECCCCEEECCCEECCCEEECCCHHHHHH
SLASDKLSAQKEVLSESCRKCMYKAICYGGCPKHRIDQDSDGMKSYFCAGYKILFSVMVP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHH
YMNALAELEKNGIPLDKIMGIVDDIECGIKSQQQH
HHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]