| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125328
Identifier: 22125328
GI number: 22125328
Start: 1585231
End: 1586340
Strand: Direct
Name: 22125328
Synonym: y1430
Alternate gene names: NA
Gene position: 1585231-1586340 (Clockwise)
Preceding gene: 22125322
Following gene: 22125329
Centisome position: 34.46
GC content: 47.39
Gene sequence:
>1110_bases ATGAGACCAGAGGTTAAATATATGTTAATGAAAATTAAAGTATTTATGTTCGCGATGGCGGCATTAACCACTCTTCCTGC ATTCGCTCAACTTCCAAGCTATTACCCCGCCGATTATCAGAAGATTGTGGATGGTGCAAAAAAAGAGGGCAAAGTGGTGG TCTATTCTGCGACGGATATTAAGGCGGCAGCCCCGTTGATTAAGGGATTCGAAGCGGCTTATCCGGGTATTAAAGTTGAA TACAACGATATGAATAGCACGGAGTTATACAACCGCTACATCAGTGAGCAGGCATCGGGGAGCACCAGTGGCGATGTTGT GTGGAGTTCCTCCATGGATACCGCACTCAAGTTGGCTACCGACTATGCGCTCGAATATCTCTCCCCTGAGCAGGCGGAGT TGCCGAAATGGGCAATATGGAAAAACAAAGCCTACGGCTCTACTTACGAACCCGTTGTCTTTATCTATAACAAGCGCCTG ATCCCACAGGCCGATATGCCTGATACCCACATCGCACTGGCAAAACTCATCGTTAGCCAGCCTGATAAATTCAAAAGGAA AGTCACAACCTATGATATTGAAAAATCAGGCTTAGGGTTCATGTTGTCGGTACAGGATTTCAAGGCGGATCCGAATTACT TTACGACACTGGCTAATATCGCTAAAGGTGGTCTGACCGTGCAATCCTCCACCGGGACGATGATGGAACGGGTGTCATCC GGTGAAAATCTGATTGGTTTTAACATCCTCGGTTCTTACGCTGAAACCCGTGCCAAAACGGACCCTTCTCTTGGGATCGC CTACCCGAAGGATTACACACTGGTGCTATCGCGGGTGACCTTTATCAGCCAAAAGGCTCCCCACCAGAATGCAGCCAAGC TGTGGGTTGACTATCTGCTCTCAGAGAAAGGCCAAAATATTCTGGCCAATCAGTCAGATATTCCTTCTATCCGCAAAGAT ATTGACGGTAACAACGATATTGATGGTCTGACCAAAAAACTGGGCAGTGCGCTGAGACCCATCCCGGTTGATGAGAGCCT ATTGGAATATATGGAACAGGCTAAACGTTTGGACTACATCAAACAGTGGCGTACCGCAGCAGCAAAATAG
Upstream 100 bases:
>100_bases AAGTTTAAAGAACGAGCGACATCACAAAATAGGAAGACAAAGAATTAACTTCGTTGCGCAGGAATAGACATTAACTATAT GTTGATTTTTCGTTTCATAA
Downstream 100 bases:
>100_bases TGGCTTTATCTGGGTGCGCTTGCCTTATGGGCATGCGCAGTCCTTGGTTTTATCGGCTTGATCATACATGGATCTTTAAC CAACAGGGCTCACTATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 369; Mature: 369
Protein sequence:
>369_residues MRPEVKYMLMKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVE YNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRL IPQADMPDTHIALAKLIVSQPDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS GENLIGFNILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKD IDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK
Sequences:
>Translated_369_residues MRPEVKYMLMKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVE YNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRL IPQADMPDTHIALAKLIVSQPDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS GENLIGFNILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKD IDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK >Mature_369_residues MRPEVKYMLMKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDIKAAAPLIKGFEAAYPGIKVE YNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLATDYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRL IPQADMPDTHIALAKLIVSQPDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS GENLIGFNILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLLSEKGQNILANQSDIPSIRKD IDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYIKQWRTAAAK
Specific function: Unknown
COG id: COG1840
COG function: function code P; ABC-type Fe3+ transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41100; Mature: 41100
Theoretical pI: Translated: 9.03; Mature: 9.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRPEVKYMLMKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCH KAAAPLIKGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLAT HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH DYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQ HHHHHHCCCCHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCC PDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS CHHHHHHHHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCC GENLIGFNILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLL CCCEEEHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SEKGQNILANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYI HHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KQWRTAAAK HHHHHHCCC >Mature Secondary Structure MRPEVKYMLMKIKVFMFAMAALTTLPAFAQLPSYYPADYQKIVDGAKKEGKVVVYSATDI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCCCEEEEECCCH KAAAPLIKGFEAAYPGIKVEYNDMNSTELYNRYISEQASGSTSGDVVWSSSMDTALKLAT HHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHCCCCCCCCEEECCCHHHHHHHHH DYALEYLSPEQAELPKWAIWKNKAYGSTYEPVVFIYNKRLIPQADMPDTHIALAKLIVSQ HHHHHHCCCCHHCCCCEEEECCCCCCCCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHCC PDKFKRKVTTYDIEKSGLGFMLSVQDFKADPNYFTTLANIAKGGLTVQSSTGTMMERVSS CHHHHHHHHEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHCCCEEEECCCHHHHHHHCC GENLIGFNILGSYAETRAKTDPSLGIAYPKDYTLVLSRVTFISQKAPHQNAAKLWVDYLL CCCEEEHHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHH SEKGQNILANQSDIPSIRKDIDGNNDIDGLTKKLGSALRPIPVDESLLEYMEQAKRLDYI HHCCCCCCCCCCCCCHHHHHCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHH KQWRTAAAK HHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA