Click here to switch to the map view.

The map label for this gene is nlpB [H]

Identifier: 22125317

GI number: 22125317

Start: 1575353

End: 1576414

Strand: Direct

Name: nlpB [H]

Synonym: y1419

Alternate gene names: 22125317

Gene position: 1575353-1576414 (Clockwise)

Preceding gene: 22125316

Following gene: 22125318

Centisome position: 34.24

GC content: 51.41

Gene sequence:

>1062_bases
TTGATGGCAATATCATTGCAAAAATCGACGGTGGTAAAAGTTGTAGGTGTTTCGCTGGTGATGTTACTGGCCGCCTGCTC
GACGGACCAACGCTACAAACGCCAGGTGAGTGGTGACGAGTCTTATCTTACAGCGCCAGGGCTAAAGCCGCTTAACGCAC
CATCAGGTATGATCCTGCCGGTACAAAATGGTGAGTTTGATGTCCGCACCGTTAATTCGCAAGGCGCTGTGGGCAAACAG
TTGGATATTCGTCCACCGGTACAACCACTGACATTATTGAGTGGCTCCCGCGCCGAAAATGCAACCGATACCAGCAAGCT
ATTGTTAGAGAATAGCCCGCAAAACCGCGATCTGTGGGCTCAGGTTACTCGTGTCCTGCAAGATCATAACTGGCCAATAG
CCAGCCGTCAGGATGCCAGCCAAACGCTGACCACTGATTGGATCAAATGGAACCGGGCAGATGAAGATGTACAGTTCGAA
GGCCGTTACCAGATAAGTGTGCAGGAGCAAGGTTATCAGCTGGCATTAGTAGTGAAATCCCTTGAGTTACAACAAGGGGG
GAAAACCATCACTCAGTATAGCGAGATCCAGCGCTATAACAGCGCAATGCTGAATGCCATTATCGAAGGTTTGGATAAAG
TGCGGGCTGACAGCGAGAGCAGTCAGGCCTCACGTAAAGTCGGTACGCTGGATGTACAAAGTGGCAGTGACGATACTGGC
TTGCCTCTGCTGATTGTCCGTGCCCCTTATGCGGTTGTCTGGGAACGTCTGCCTGCTGCGCTTGAGAAAGTTGGCATGAA
AGTGACCGACCGCAGCCGTCCGCAAGGTACTGTCAGCGTCACCAGTAAATCGCTGAGTAGCAGTAGCTGGGACGCACTGG
GTGCCAAAGATCCTGAATTGCCAGAAGGCGATTATAAGTTACAGGTCGGTGACCTTGATAACCGCAGTAGCTTACAGTTC
ATTGGTCCGAAAGGGCATACCTTAACCCAGGCGCAGAATGATGCGTTGGTTGCGGTATTCCAGGCAGCGTTTAGCCAGAC
TAGCGCAACCGCGATAAAATAA

Upstream 100 bases:

>100_bases
ATACTATGCGCCTGCCAATGACCCCACTGACTGATCCGGCCAAACGGATTGTGGAAGACGCGTTGAAAAGCGCAGGTTTG
CTGTAACTTCTTAGGGAAAT

Downstream 100 bases:

>100_bases
AACCAAAGGGGCTTCGGCCCCTTTAGTTATTGTGCCCAGAAAACCCCCAGCTAGGCTGGGGGTTCAGTAAAGCTTTCAGC
TTTGGGTCAGTTATAAAAAC

Product: lipoprotein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 353; Mature: 353

Protein sequence:

>353_residues
MMAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPVQNGEFDVRTVNSQGAVGKQ
LDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFE
GRYQISVQEQGYQLALVVKSLELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTG
LPLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELPEGDYKLQVGDLDNRSSLQF
IGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK

Sequences:

>Translated_353_residues
MMAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPVQNGEFDVRTVNSQGAVGKQ
LDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFE
GRYQISVQEQGYQLALVVKSLELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTG
LPLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELPEGDYKLQVGDLDNRSSLQF
IGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK
>Mature_353_residues
MMAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILPVQNGEFDVRTVNSQGAVGKQ
LDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWAQVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFE
GRYQISVQEQGYQLALVVKSLELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTG
LPLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPELPEGDYKLQVGDLDNRSSLQF
IGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK

Specific function: Non-essential lipoprotein [H]

COG id: COG3317

COG function: function code M; Uncharacterized lipoprotein

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082112, Length=345, Percent_Identity=62.8985507246377, Blast_Score=442, Evalue=1e-125,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010653
- InterPro:   IPR014524 [H]

Pfam domain/function: PF06804 Lipoprotein_18 [H]

EC number: NA

Molecular weight: Translated: 38459; Mature: 38459

Theoretical pI: Translated: 5.93; Mature: 5.93

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILP
CEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCEEEE
VQNGEFDVRTVNSQGAVGKQLDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWA
ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCHHHHHCCCCCCCCHHHH
QVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEGRYQISVQEQGYQLALVVKS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCEEECCEEEEEEECCCEEEEEEEEH
LELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCC
LPLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPEL
CEEEEEECCHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCC
PEGDYKLQVGDLDNRSSLQFIGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK
CCCCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHCCCHHCCC
>Mature Secondary Structure
MMAISLQKSTVVKVVGVSLVMLLAACSTDQRYKRQVSGDESYLTAPGLKPLNAPSGMILP
CEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCCEEECCCCCCCCCCCCEEEE
VQNGEFDVRTVNSQGAVGKQLDIRPPVQPLTLLSGSRAENATDTSKLLLENSPQNRDLWA
ECCCCEEEEEECCCCCCCCCCCCCCCCCHHHEECCCCCCCCCCHHHHHCCCCCCCCHHHH
QVTRVLQDHNWPIASRQDASQTLTTDWIKWNRADEDVQFEGRYQISVQEQGYQLALVVKS
HHHHHHHHCCCCCCCCCCCHHHHHHHHHEECCCCCCEEECCEEEEEEECCCEEEEEEEEH
LELQQGGKTITQYSEIQRYNSAMLNAIIEGLDKVRADSESSQASRKVGTLDVQSGSDDTG
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHCCCEEEECCCCCCCC
LPLLIVRAPYAVVWERLPAALEKVGMKVTDRSRPQGTVSVTSKSLSSSSWDALGAKDPEL
CEEEEEECCHHHHHHHHHHHHHHHCCEECCCCCCCCEEEEEHHHCCCCCCCCCCCCCCCC
PEGDYKLQVGDLDNRSSLQFIGPKGHTLTQAQNDALVAVFQAAFSQTSATAIK
CCCCEEEEECCCCCCCCEEEECCCCCEECCCCCCHHHHHHHHHHHCCCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 1885529; 2120198; 9205837; 9278503 [H]