| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yqgH [H]
Identifier: 22125298
GI number: 22125298
Start: 1558546
End: 1560261
Strand: Direct
Name: yqgH [H]
Synonym: y1400
Alternate gene names: 22125298
Gene position: 1558546-1560261 (Clockwise)
Preceding gene: 22125297
Following gene: 22125299
Centisome position: 33.88
GC content: 51.05
Gene sequence:
>1716_bases GTGATGAAAACAGGATCTACAAACATCCATCTTATAAACACGGGTCTTATAAACACGGGCCTTATAAACAAATGGGTTAA ATCTGGCTCGCCGTGGATCTGGCTAACTGCGGCGTCAGTCAGTATTAGCTTGTTGGCGCTGATTGGCGTCATCTTATTGT TGGCAGGGCAGGGAATGCGTTATTTCTGGCCCAGCCCGGTCTACCAATTTGAGTTGAAACAAACCGCTGCCGGCCCGGTA AGACTGGTGGGGGAAATTTATCGGCAACAATCTCTACCGCGGCAGCAATTAGAACAGGCCGGGATGACTCTACCGCCAAA TACGGGTGATTCAGTCACTCGCTTGCTGATCAAGTCAGGTAACCGTGAGGTTCAGGGGCAGGATTTCTATACCTTGCTGG AGAGTGATATTCAACAGCGCAGCCTGCCGAAGGGGCTATTGGCTCTGGACCGCCATAACAATGGTATGGCGTATGGTTTG CTTGCCGGTATGTTGGATAACGGGCAGCCATTAGTTGGCGATAACCTAAGACAAGAGCTGCAAAAACGCATCCCCATTGT GCAGGCGCTGGTCAGGCAAGCTAATGATATTCAGTTCCGCCAAATGAGTATGCTCAATCAACAATTTGAAGCATTACGGT TACAAAAGAAACGGCTGCAAATTGCCGGAGATTTAGACAGCAAATCGCAGGATCGTATTGACGCAGAGCTGGGGGAGTTA CAACGTCGTCACCAGACTCTTATCGATAAACTGCGGAGCTTACAAACGGAAAAACACCGCTATACACTCTTGTGGCAAGA TATGAATGGGCAAATACACCCGCTGCCACTGAGTGAAATTAACCGGGCCTGGTATCCCAACGACATGAGTTTCGGGCAGA AGTTGCGGCACTGGGCGGCACAAACCAAAAAGTTTTTGACCGACAATCCGTACAATGCGAGTTCCGAAGGCGGTGTTTTT CCCGCTATTTTCGGTACGGTGCTGATGGTGATTTTAATGTCTATCGTGGTGATGCCATTAGGGGTGATCGCGGCGGTTTA TTTGCATGAATACGCCGGGAAAAATTGGCTGACTCGCCTGATCCGTATCTCTGTGGTGAATCTGGCTGGGGTCCCCTCCA TTGTGTATGGGGTATTTGGTCTGGGGTTCTTTGTTTATCTGATTGGTGGTTCGCTAGATAAGCTCTTTTATGCCGAGTCA TTGCCTAATCCAACATTTGGCACACCGGGTGTGCTGTGGGCGGCGTTAACGCTGGCTTTATTGACGTTGCCCGTGGTGAT TGTTGCCACCGAAGAAGGGCTAGCCCGCATTCCAACCAGTTTGCGGCAAGGATCACAGGCTTTGGGGGCCAGCAAGGCTG AGACACTGTGGCACATCGTGCTACCGATGGCGGCACCTGCGATGCTCACGGGGCTGATTTTAGCTGTCGCTCGAGCCGCG GGGGAGACCGCACCGCTGATGTTAGTGGGGGTGGTTAAATCCGCCCCGGTATTGCCGGTCGATGGTATTTTCCCTTTCCT ACATTTGGAGCGCAAATTCATGCATCTGAGCTTCCAGATCTATGATATGGCGTTCCAAAGCCCGAATGTGGAAGCGGCCC GCCCATTGGTTTTTGCCACCGCACTGCTACTGGTGATCATTGTCGTTGGCCTTAATTTAGCCGCGATGGGGATTCGTCAC CATCTGCGTGAGAAGTACCGTGGCTTAATGTTGTAA
Upstream 100 bases:
>100_bases TGACGGCATTGGTCTTATTCTGCTTTACGTTTTTGGTGAATACGCTGGCAGAAGCGGTTCGCCTGCGGCTGCGTGAACGC TATCAAATGGAGCGGACAGC
Downstream 100 bases:
>100_bases TTGGATTCTTAACCTGCAGGACATGATATGGGACTTTTGACGCCGAATTCGTTGCCGCTACTTGATGTACAGCATTTGAC TGATGAGCAAACTGCACTGG
Product: inner membrane permease of high-affinity phosphate-specific ABC transporter
Products: ADP; phosphate [Cytoplasm]; phosphate [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 571; Mature: 571
Protein sequence:
>571_residues MMKTGSTNIHLINTGLINTGLINKWVKSGSPWIWLTAASVSISLLALIGVILLLAGQGMRYFWPSPVYQFELKQTAAGPV RLVGEIYRQQSLPRQQLEQAGMTLPPNTGDSVTRLLIKSGNREVQGQDFYTLLESDIQQRSLPKGLLALDRHNNGMAYGL LAGMLDNGQPLVGDNLRQELQKRIPIVQALVRQANDIQFRQMSMLNQQFEALRLQKKRLQIAGDLDSKSQDRIDAELGEL QRRHQTLIDKLRSLQTEKHRYTLLWQDMNGQIHPLPLSEINRAWYPNDMSFGQKLRHWAAQTKKFLTDNPYNASSEGGVF PAIFGTVLMVILMSIVVMPLGVIAAVYLHEYAGKNWLTRLIRISVVNLAGVPSIVYGVFGLGFFVYLIGGSLDKLFYAES LPNPTFGTPGVLWAALTLALLTLPVVIVATEEGLARIPTSLRQGSQALGASKAETLWHIVLPMAAPAMLTGLILAVARAA GETAPLMLVGVVKSAPVLPVDGIFPFLHLERKFMHLSFQIYDMAFQSPNVEAARPLVFATALLLVIIVVGLNLAAMGIRH HLREKYRGLML
Sequences:
>Translated_571_residues MMKTGSTNIHLINTGLINTGLINKWVKSGSPWIWLTAASVSISLLALIGVILLLAGQGMRYFWPSPVYQFELKQTAAGPV RLVGEIYRQQSLPRQQLEQAGMTLPPNTGDSVTRLLIKSGNREVQGQDFYTLLESDIQQRSLPKGLLALDRHNNGMAYGL LAGMLDNGQPLVGDNLRQELQKRIPIVQALVRQANDIQFRQMSMLNQQFEALRLQKKRLQIAGDLDSKSQDRIDAELGEL QRRHQTLIDKLRSLQTEKHRYTLLWQDMNGQIHPLPLSEINRAWYPNDMSFGQKLRHWAAQTKKFLTDNPYNASSEGGVF PAIFGTVLMVILMSIVVMPLGVIAAVYLHEYAGKNWLTRLIRISVVNLAGVPSIVYGVFGLGFFVYLIGGSLDKLFYAES LPNPTFGTPGVLWAALTLALLTLPVVIVATEEGLARIPTSLRQGSQALGASKAETLWHIVLPMAAPAMLTGLILAVARAA GETAPLMLVGVVKSAPVLPVDGIFPFLHLERKFMHLSFQIYDMAFQSPNVEAARPLVFATALLLVIIVVGLNLAAMGIRH HLREKYRGLML >Mature_571_residues MMKTGSTNIHLINTGLINTGLINKWVKSGSPWIWLTAASVSISLLALIGVILLLAGQGMRYFWPSPVYQFELKQTAAGPV RLVGEIYRQQSLPRQQLEQAGMTLPPNTGDSVTRLLIKSGNREVQGQDFYTLLESDIQQRSLPKGLLALDRHNNGMAYGL LAGMLDNGQPLVGDNLRQELQKRIPIVQALVRQANDIQFRQMSMLNQQFEALRLQKKRLQIAGDLDSKSQDRIDAELGEL QRRHQTLIDKLRSLQTEKHRYTLLWQDMNGQIHPLPLSEINRAWYPNDMSFGQKLRHWAAQTKKFLTDNPYNASSEGGVF PAIFGTVLMVILMSIVVMPLGVIAAVYLHEYAGKNWLTRLIRISVVNLAGVPSIVYGVFGLGFFVYLIGGSLDKLFYAES LPNPTFGTPGVLWAALTLALLTLPVVIVATEEGLARIPTSLRQGSQALGASKAETLWHIVLPMAAPAMLTGLILAVARAA GETAPLMLVGVVKSAPVLPVDGIFPFLHLERKFMHLSFQIYDMAFQSPNVEAARPLVFATALLLVIIVVGLNLAAMGIRH HLREKYRGLML
Specific function: Part of the binding-protein-dependent transport system yqgGHIJK. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4985
COG function: function code P; ABC-type phosphate transport system, auxiliary component
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1790163, Length=251, Percent_Identity=32.2709163346614, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1790164, Length=190, Percent_Identity=29.4736842105263, Blast_Score=77, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011864 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 63187; Mature: 63187
Theoretical pI: Translated: 10.16; Mature: 10.16
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMKTGSTNIHLINTGLINTGLINKWVKSGSPWIWLTAASVSISLLALIGVILLLAGQGMR CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC YFWPSPVYQFELKQTAAGPVRLVGEIYRQQSLPRQQLEQAGMTLPPNTGDSVTRLLIKSG CCCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCC NREVQGQDFYTLLESDIQQRSLPKGLLALDRHNNGMAYGLLAGMLDNGQPLVGDNLRQEL CCCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHH QKRIPIVQALVRQANDIQFRQMSMLNQQFEALRLQKKRLQIAGDLDSKSQDRIDAELGEL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QRRHQTLIDKLRSLQTEKHRYTLLWQDMNGQIHPLPLSEINRAWYPNDMSFGQKLRHWAA HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH QTKKFLTDNPYNASSEGGVFPAIFGTVLMVILMSIVVMPLGVIAAVYLHEYAGKNWLTRL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IRISVVNLAGVPSIVYGVFGLGFFVYLIGGSLDKLFYAESLPNPTFGTPGVLWAALTLAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LTLPVVIVATEEGLARIPTSLRQGSQALGASKAETLWHIVLPMAAPAMLTGLILAVARAA HHHCEEEEECCCCHHHCCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GETAPLMLVGVVKSAPVLPVDGIFPFLHLERKFMHLSFQIYDMAFQSPNVEAARPLVFAT CCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHH ALLLVIIVVGLNLAAMGIRHHLREKYRGLML HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MMKTGSTNIHLINTGLINTGLINKWVKSGSPWIWLTAASVSISLLALIGVILLLAGQGMR CCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEEHHHHHHHHHHHHHHHHHHCCCCC YFWPSPVYQFELKQTAAGPVRLVGEIYRQQSLPRQQLEQAGMTLPPNTGDSVTRLLIKSG CCCCCCCEEEEHHHHCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCHHHHHHHHHCC NREVQGQDFYTLLESDIQQRSLPKGLLALDRHNNGMAYGLLAGMLDNGQPLVGDNLRQEL CCCCCCCHHHHHHHHHHHHHCCCCHHHEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHH QKRIPIVQALVRQANDIQFRQMSMLNQQFEALRLQKKRLQIAGDLDSKSQDRIDAELGEL HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHH QRRHQTLIDKLRSLQTEKHRYTLLWQDMNGQIHPLPLSEINRAWYPNDMSFGQKLRHWAA HHHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCCHHHHCCCCCCCCHHHHHHHHHHHH QTKKFLTDNPYNASSEGGVFPAIFGTVLMVILMSIVVMPLGVIAAVYLHEYAGKNWLTRL HHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH IRISVVNLAGVPSIVYGVFGLGFFVYLIGGSLDKLFYAESLPNPTFGTPGVLWAALTLAL HHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHH LTLPVVIVATEEGLARIPTSLRQGSQALGASKAETLWHIVLPMAAPAMLTGLILAVARAA HHHCEEEEECCCCHHHCCHHHHCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GETAPLMLVGVVKSAPVLPVDGIFPFLHLERKFMHLSFQIYDMAFQSPNVEAARPLVFAT CCCCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHHHHHEEHHHHCCCCCCHHHHHHHHH ALLLVIIVVGLNLAAMGIRHHLREKYRGLML HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; phosphate [Periplasm]; H2O [C]
Specific reaction: ATP + phosphate [Periplasm] + H2O = ADP + phosphate [Cytoplasm] + phosphate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8760913; 8969508; 9384377 [H]