Click here to switch to the map view.

The map label for this gene is ykfE [C]

Identifier: 22125275

GI number: 22125275

Start: 1525085

End: 1525594

Strand: Direct

Name: ykfE [C]

Synonym: y1376

Alternate gene names: 22125275

Gene position: 1525085-1525594 (Clockwise)

Preceding gene: 22125272

Following gene: 22125276

Centisome position: 33.15

GC content: 51.37

Gene sequence:

>510_bases
ATGAAAGGCCAAAAAAACCTCCATTGTCTTTTAGCGGGAATATTATTGAGTATCAGCTCTGGCTCCTTTGCACAGCCAGC
AGCAGTGGTCTCATCCCCTGGGGTTACCGTACCTGAGCCGGTAGCCTCAACGCCCACCATGGCTGAACTTCTCCAGCAAC
CTGTCTATAAAGCCCGTTGGCAAAAAATGGTAAAGGGGCAGAAAAATTTGCCGGCATGGGCACGTAAAGGGGCGGGAACG
TCAGGGCCTTATGAAAACATCACGTGGGGCGCACAGCAATATAAAGTGGGGAGTCTCTGTAAGCCTCACGATTGCAGTAA
TAACTTTATGTGGGTGGCGTTTAGCAACGATAAAAAGCACGTGTGGGGCCTGCGAGTTACCGTGGCTGACAAGCCCGAGG
CGTTGGATAACCCAAGTAAATTTGCGACTTATCAGTGGCTGGGTCGCCCCAATGAGAATATCCAGGCCATGTTGACCGCG
CAGCTAGAGAAAGATCCTAACTGGCGCTGA

Upstream 100 bases:

>100_bases
GGCGACGCGACATCACATGGCGCATTCAAGTCCGCTGAACAGCGTCCCCCTTTATCACTGCCTGACGCGTTGATTAATCA
TATAAAAAAGGAATTCGATA

Downstream 100 bases:

>100_bases
GTTTTGCACGTCATGACTCTTATGAGTGATGACTTATTGCCAACAATGCCCCGAATCGCCAATGGCGGAGCAAGACAAGG
GCGGTTCTCGCCGTGCTCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKGQKNLHCLLAGILLSISSGSFAQPAAVVSSPGVTVPEPVASTPTMAELLQQPVYKARWQKMVKGQKNLPAWARKGAGT
SGPYENITWGAQQYKVGSLCKPHDCSNNFMWVAFSNDKKHVWGLRVTVADKPEALDNPSKFATYQWLGRPNENIQAMLTA
QLEKDPNWR

Sequences:

>Translated_169_residues
MKGQKNLHCLLAGILLSISSGSFAQPAAVVSSPGVTVPEPVASTPTMAELLQQPVYKARWQKMVKGQKNLPAWARKGAGT
SGPYENITWGAQQYKVGSLCKPHDCSNNFMWVAFSNDKKHVWGLRVTVADKPEALDNPSKFATYQWLGRPNENIQAMLTA
QLEKDPNWR
>Mature_169_residues
MKGQKNLHCLLAGILLSISSGSFAQPAAVVSSPGVTVPEPVASTPTMAELLQQPVYKARWQKMVKGQKNLPAWARKGAGT
SGPYENITWGAQQYKVGSLCKPHDCSNNFMWVAFSNDKKHVWGLRVTVADKPEALDNPSKFATYQWLGRPNENIQAMLTA
QLEKDPNWR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ivy family [H]

Homologues:

Organism=Escherichia coli, GI1786413, Length=115, Percent_Identity=35.6521739130435, Blast_Score=65, Evalue=3e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014453 [H]

Pfam domain/function: PF08816 Ivy [H]

EC number: NA

Molecular weight: Translated: 18652; Mature: 18652

Theoretical pI: Translated: 10.07; Mature: 10.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGQKNLHCLLAGILLSISSGSFAQPAAVVSSPGVTVPEPVASTPTMAELLQQPVYKARW
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QKMVKGQKNLPAWARKGAGTSGPYENITWGAQQYKVGSLCKPHDCSNNFMWVAFSNDKKH
HHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCE
VWGLRVTVADKPEALDNPSKFATYQWLGRPNENIQAMLTAQLEKDPNWR
EEEEEEEECCCCCCCCCCCHHEEEEECCCCCCCCEEEEEEECCCCCCCC
>Mature Secondary Structure
MKGQKNLHCLLAGILLSISSGSFAQPAAVVSSPGVTVPEPVASTPTMAELLQQPVYKARW
CCCCCHHHHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHH
QKMVKGQKNLPAWARKGAGTSGPYENITWGAQQYKVGSLCKPHDCSNNFMWVAFSNDKKH
HHHHCCCCCCCHHHHCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCEEEEEECCCCCE
VWGLRVTVADKPEALDNPSKFATYQWLGRPNENIQAMLTAQLEKDPNWR
EEEEEEEECCCCCCCCCCCHHEEEEECCCCCCCCEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11586360; 12142430 [H]