| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125271
Identifier: 22125271
GI number: 22125271
Start: 1522115
End: 1522594
Strand: Reverse
Name: 22125271
Synonym: y1372
Alternate gene names: NA
Gene position: 1522594-1522115 (Counterclockwise)
Preceding gene: 22125273
Following gene: 22125269
Centisome position: 33.09
GC content: 32.92
Gene sequence:
>480_bases TTGAGATTGACGATGGCCGTGATGATACTAAGAAATAAAAAATTTTCACTTCTCTCGTTGCTGCTCATATCTGCACTAAT TTATTTTTTATGGATGGAATTCAAACCGGTTAAAATTATCGCAGTTCATCAAAGAAATAATTACAGTGATATTTTAGTGG AGAACTTCCCTATCACTGATAGCGGAAAAATAGCTTGGTGGATAAAAAATAAAAGTATGTTGGCAGAGAAATATAAAATA CCCAAGCCTGCATCATATGGTTCTTTTACTATTATTTTCTGGGATTTCGGTGATGGCTATCAAGAGGAAGGTAAATATGA CAGATTGTGCTTCGATGATATGAAAACCGCTGAGAATTGTATAGATAAAAATTCATTTCTTACAGTAAGAAACACACCTG ACAATAGAGTATTTTTTATTGTTGACAATGGTAAATACTTACTTAAAGAGAGTAACAAGGTGACTAAGGTAAGAGAGTAG
Upstream 100 bases:
>100_bases CTGTAGGAAAATTTTGAATATTCTATAAATGAAGTAAATACCCTTGTATTGAATCTGTATACATAGAAGACTGTTTAACT TGTACCTATGGAAGTAACCA
Downstream 100 bases:
>100_bases CCAACGCACATACAGATTGAAGTATGACAGATATAAAACATATTAAAGAGGGATCTGAATGACATATAAAAAGTATAACT CCAGTTGGGAAGGCTACATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 159
Protein sequence:
>159_residues MRLTMAVMILRNKKFSLLSLLLISALIYFLWMEFKPVKIIAVHQRNNYSDILVENFPITDSGKIAWWIKNKSMLAEKYKI PKPASYGSFTIIFWDFGDGYQEEGKYDRLCFDDMKTAENCIDKNSFLTVRNTPDNRVFFIVDNGKYLLKESNKVTKVRE
Sequences:
>Translated_159_residues MRLTMAVMILRNKKFSLLSLLLISALIYFLWMEFKPVKIIAVHQRNNYSDILVENFPITDSGKIAWWIKNKSMLAEKYKI PKPASYGSFTIIFWDFGDGYQEEGKYDRLCFDDMKTAENCIDKNSFLTVRNTPDNRVFFIVDNGKYLLKESNKVTKVRE >Mature_159_residues MRLTMAVMILRNKKFSLLSLLLISALIYFLWMEFKPVKIIAVHQRNNYSDILVENFPITDSGKIAWWIKNKSMLAEKYKI PKPASYGSFTIIFWDFGDGYQEEGKYDRLCFDDMKTAENCIDKNSFLTVRNTPDNRVFFIVDNGKYLLKESNKVTKVRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18700; Mature: 18700
Theoretical pI: Translated: 9.69; Mature: 9.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLTMAVMILRNKKFSLLSLLLISALIYFLWMEFKPVKIIAVHQRNNYSDILVENFPITD CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCC SGKIAWWIKNKSMLAEKYKIPKPASYGSFTIIFWDFGDGYQEEGKYDRLCFDDMKTAENC CCCEEEEEECCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH IDKNSFLTVRNTPDNRVFFIVDNGKYLLKESNKVTKVRE CCCCCEEEEEECCCCEEEEEEECCEEEEECCCCEEECCC >Mature Secondary Structure MRLTMAVMILRNKKFSLLSLLLISALIYFLWMEFKPVKIIAVHQRNNYSDILVENFPITD CCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCCCCCEEEECCCCCC SGKIAWWIKNKSMLAEKYKIPKPASYGSFTIIFWDFGDGYQEEGKYDRLCFDDMKTAENC CCCEEEEEECCHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHH IDKNSFLTVRNTPDNRVFFIVDNGKYLLKESNKVTKVRE CCCCCEEEEEECCCCEEEEEEECCEEEEECCCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA