| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is 22125267
Identifier: 22125267
GI number: 22125267
Start: 1518981
End: 1519376
Strand: Reverse
Name: 22125267
Synonym: y1368
Alternate gene names: NA
Gene position: 1519376-1518981 (Counterclockwise)
Preceding gene: 22125268
Following gene: 22125266
Centisome position: 33.02
GC content: 26.01
Gene sequence:
>396_bases ATGAAAAATAGACCTTTCAACATTCTATTTGGAATGATAATATTTTCAGTGGTTTTATTTATGATGTATTTGGTTTTTTT ATGTCTCATTTCATTAATTAGAATGGAAGATAAAATAACATTCTCAAGTTCTATTGTTATATGTTTGATTTCGTCTCCTC TATTATTTTATGCTACCGCAGGGTCTGTTTATATTTTTGTATTTAATAAAGAACCTAAATTTAACAAAATGATTGTAAAA TACTTAACTATGCTAGCAATAGCATCATTCATCATGAGTTTTCCTATTTCTTTTTATGTTGATTACAAATTAAAAAGTAA TGGCTATGTAGTATGTGACAAAATCTCATGGATGTCGCCGAATTTTTATGTAAGAGATTTATCACTTTGTAGATAA
Upstream 100 bases:
>100_bases GAATACTTATGTAAAAGACTTATCACTTTGTAGATAAATATAAAATATTCAACAGAAAAAGATAATTATAAATACAGTAA ACTGGAACCGAGTAATTAAG
Downstream 100 bases:
>100_bases AAATAAAATATTTAACAAGAAAATAATTTTAAATACAGTGAAGTGGATCAGGGTAATTGAGATGAAAAATAGACTTTTCA ATGCACTACTTGGGGTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 131; Mature: 131
Protein sequence:
>131_residues MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATAGSVYIFVFNKEPKFNKMIVK YLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSPNFYVRDLSLCR
Sequences:
>Translated_131_residues MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATAGSVYIFVFNKEPKFNKMIVK YLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSPNFYVRDLSLCR >Mature_131_residues MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATAGSVYIFVFNKEPKFNKMIVK YLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSPNFYVRDLSLCR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15268; Mature: 15268
Theoretical pI: Translated: 9.59; Mature: 9.59
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 6.9 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 6.9 %Met (Mature Protein) 9.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCEEEEEEC GSVYIFVFNKEPKFNKMIVKYLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSP CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEECCCCCC NFYVRDLSLCR CEEEECCCCCC >Mature Secondary Structure MKNRPFNILFGMIIFSVVLFMMYLVFLCLISLIRMEDKITFSSSIVICLISSPLLFYATA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEEEECCCEEEEEEC GSVYIFVFNKEPKFNKMIVKYLTMLAIASFIMSFPISFYVDYKLKSNGYVVCDKISWMSP CEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCEEEEEECCCCCC NFYVRDLSLCR CEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA