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The map label for this gene is csiE [H]

Identifier: 22125225

GI number: 22125225

Start: 1474331

End: 1475722

Strand: Reverse

Name: csiE [H]

Synonym: y1328

Alternate gene names: 22125225

Gene position: 1475722-1474331 (Counterclockwise)

Preceding gene: 22125230

Following gene: 22125220

Centisome position: 32.08

GC content: 46.77

Gene sequence:

>1392_bases
ATGCGCCTAAACACGCCCTTTAAGCCTCGGTTATCTGATGATCAACCGCTATCTGGTCAACAACGCCGCTGCCATATGTT
GCTGATGTTATTTATGCCAGCACGCAAGGTACAGTTAGACACCATTAGCCAATTTAACGGGGTCGATCTTGCGACTACCC
GGCAAGATATAGCCGAGGTTGCTAGCGAAATCCAGCGTTTCTACCATTTGGAACTTAATGCCAGTGCCGACGATTATTAT
CAGATTAATGGGAGCCGACTCGATAAACGACTCTGTTTGATCCATTGGCTACGTCGTGGGCTGCGTTATTGTCCACATTT
TATTGAACACTATTTTTCCCCCGACTTATATCAAGCACTGGCGTGGAATAATGGCCTGCTGTCGTCGGCTCTGCGACGAT
CAACTCTACGACAATCAACTTTGCGACAATCAACTTTGCGACAATCAACTTTGCGACAATCAACTTTGCGGCAATCAATT
CTACGGCAATCAACTTTGCGACAAATCGTTTACCAGTGTGAGCCCCACCTAAACCGCCAACTCAGTGAAAAAGATCGTCA
GTTTTTGCAACTGTATTTGGCGTATTGTGTCTGGGAAAACCAACAGCACACCGTGCCACAATTATCCATGACCCAACAGC
AATGGTTAGAACAAAAACCTGCGCGGGTTGCCGCTGATCATTTATTCAATGCACTCAACCGGTTATTGATCCCTCCGCTG
GGTTTAATTGAGCGCGATATGCTGATCCTGATGTTGACAATGATCAAAGCACACCACTACCACAGCACCCAATCACCGGA
AGATGCCCGCCTGATAGCGGCTATCAAGCAATTAATTCACCGTTTTAAGCGACTGTCCGGCATGCATTTTAGTTGTGATG
ACTCGCTGGTCAGCCAGCTATTCGCGCATCTCGCCCCCGCCATTGAGCGTTGCTATTTTAATATTGGGATCGACCATTCA
CTCCCCAAAGATATCAGTAAGATGTATCCCCGTTTGCTCCGTACCACACAGCAGGCGCTGATCAAGTTTGAGCAGGAGTA
CCAGATTCGCTTTTCTATTGAAGAAGTGATTTTGATCGCCATCAGCTTCGGTGCCTGGTTAATACAGGGGAATGCATTAC
AGGAGAAGCAGATTTTATTATTGACGCACGATAACCCAATATTGGAAGCCCAAGTCGAGCAGCAAATTCGTGAACTGACC
TTACTACCGCTACATATTAAATATTTATCTCATGATGTTTATCTGCAATCAGGGGCCCCCGCGGGCACTGCGGTGGTACT
TACCCCCTATGTTTTGCAATCAACTGAATCAGCGCCGCCGCTGATTCAGATATCATTTCCGTTAACTGAGCCGCAAAGTA
TTCAGTTATGCCGCATATTGGAACTGCCTTAG

Upstream 100 bases:

>100_bases
TGTAAGTCGATGTAAAAAACTACTGGCCCGGTAAACCGAATGAATCTCTTTTGCTATGCTTAAATCCGATAAATAACGAT
GATTCATCAAAGATATTTAT

Downstream 100 bases:

>100_bases
CTGGCTAATTCATTTGGGTTCGCGGCCACTCGTGGCCGGATAAACAGCGCCGGAATAACAATGAGCGCCATAACCCAAAA
GACCCCACTCTGATAATTCT

Product: stationary phase inducible protein CsiE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 463; Mature: 463

Protein sequence:

>463_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSTLRQSTLRQSI
LRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPL
GLIERDMLILMLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHS
LPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELT
LLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP

Sequences:

>Translated_463_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSTLRQSTLRQSI
LRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPL
GLIERDMLILMLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHS
LPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELT
LLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP
>Mature_463_residues
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEVASEIQRFYHLELNASADDYY
QINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQALAWNNGLLSSALRRSTLRQSTLRQSTLRQSTLRQSTLRQSI
LRQSTLRQIVYQCEPHLNRQLSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPL
GLIERDMLILMLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQLFAHLAPAIERCYFNIGIDHS
LPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIAISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELT
LLPLHIKYLSHDVYLQSGAPAGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP

Specific function: Unknown

COG id: COG3711

COG function: function code K; Transcriptional antiterminator

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 PRD domains [H]

Homologues:

Organism=Escherichia coli, GI87082124, Length=453, Percent_Identity=36.644591611479, Blast_Score=281, Evalue=6e-77,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011608 [H]

Pfam domain/function: PF00874 PRD [H]

EC number: NA

Molecular weight: Translated: 53759; Mature: 53759

Theoretical pI: Translated: 8.84; Mature: 8.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHH
ASEIQRFYHLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQAL
HHHHHHHEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AWNNGLLSSALRRSTLRQSTLRQSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
GLIERDMLILMLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQL
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FAHLAPAIERCYFNIGIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHH
ISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAP
HHHHHHEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
AGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP
CCCEEEECHHHHHCCCCCCCEEEEECCCCCCCCCCHHHEECCC
>Mature Secondary Structure
MRLNTPFKPRLSDDQPLSGQQRRCHMLLMLFMPARKVQLDTISQFNGVDLATTRQDIAEV
CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHCCCCCCHHHHHHHHHH
ASEIQRFYHLELNASADDYYQINGSRLDKRLCLIHWLRRGLRYCPHFIEHYFSPDLYQAL
HHHHHHHEEEEECCCCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH
AWNNGLLSSALRRSTLRQSTLRQSTLRQSTLRQSTLRQSILRQSTLRQIVYQCEPHLNRQ
HCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
LSEKDRQFLQLYLAYCVWENQQHTVPQLSMTQQQWLEQKPARVAADHLFNALNRLLIPPL
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCC
GLIERDMLILMLTMIKAHHYHSTQSPEDARLIAAIKQLIHRFKRLSGMHFSCDDSLVSQL
CHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
FAHLAPAIERCYFNIGIDHSLPKDISKMYPRLLRTTQQALIKFEQEYQIRFSIEEVILIA
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEHHHHHHHH
ISFGAWLIQGNALQEKQILLLTHDNPILEAQVEQQIRELTLLPLHIKYLSHDVYLQSGAP
HHHHHHEEECCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
AGTAVVLTPYVLQSTESAPPLIQISFPLTEPQSIQLCRILELP
CCCEEEECHHHHHCCCCCCCEEEEECCCCCCCCCCHHHEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9205837; 9278503 [H]