| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22125156
Identifier: 22125156
GI number: 22125156
Start: 1403190
End: 1403558
Strand: Reverse
Name: 22125156
Synonym: y1256
Alternate gene names: NA
Gene position: 1403558-1403190 (Counterclockwise)
Preceding gene: 22125160
Following gene: 22125150
Centisome position: 30.51
GC content: 46.61
Gene sequence:
>369_bases GTGGTGAAACAGTTTACATCAGGACTCATAATTTCAACATTTTTCCTGGCAGTGCCAGGCTATGCAGCCAGTTTTGACTG CGACAACGCAAAAGGCTACGTAGAGACATCAATCTGTACCAACCCTGTTCTTTCTAAACTGGATGATACACTTCTCAGCG TTTATGCTAAGGCGCAGGCTGCAGCACCTGACCAAGAAATCAATATTCGCAATGAACAGCGTGAATGGCTAAAGAACTCA CGTAATACTCTCACGAGTGAAGATGCCTTGATTTTGTCGTACGAGGCCCGGATTGCTCAGCTTTCGAAAGCGAATGTTTC GATTCCAGCATCGGCTGCATCTGAAACCCCGGTATCAACGCCAGACTGA
Upstream 100 bases:
>100_bases TTTTTTCAAGAAAAACGCTGAAGGTGATTACTTTTTGTCTTTCGATCAATAATACTCAATGGCTCAATATGATAACTAAA TGAGAATGAAGGGATAAAAC
Downstream 100 bases:
>100_bases ATCCTCTCAATCTGTCGATTTCTCTCAATGAGTCGCCTCTTGTAGGATAATGCCCCTAAAAATGGGGGCATTATCTGTGA TGTCTATGATAACCACTCCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 122; Mature: 122
Protein sequence:
>122_residues MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS RNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVSTPD
Sequences:
>Translated_122_residues MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS RNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVSTPD >Mature_122_residues MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQAAAPDQEINIRNEQREWLKNS RNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVSTPD
Specific function: Unknown
COG id: COG4461
COG function: function code S; Uncharacterized protein conserved in bacteria, putative lipoprotein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13190; Mature: 13190
Theoretical pI: Translated: 4.42; Mature: 4.42
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHH AAPDQEINIRNEQREWLKNSRNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVST CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC PD CC >Mature Secondary Structure MVKQFTSGLIISTFFLAVPGYAASFDCDNAKGYVETSICTNPVLSKLDDTLLSVYAKAQA CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEECCHHCCHHHHHHHHHHHHHHHHHHH AAPDQEINIRNEQREWLKNSRNTLTSEDALILSYEARIAQLSKANVSIPASAASETPVST CCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEEEHHHHHHHHHCCCCCCCCCCCCCCCCCC PD CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA