| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is celA [H]
Identifier: 22125151
GI number: 22125151
Start: 1398970
End: 1399317
Strand: Direct
Name: celA [H]
Synonym: y1251
Alternate gene names: 22125151
Gene position: 1398970-1399317 (Clockwise)
Preceding gene: 22125147
Following gene: 22125152
Centisome position: 30.41
GC content: 43.97
Gene sequence:
>348_bases GTGTCTTTTGAACATCAAAAGGTGTTGGGTATGGAAAAGAAAAAAATTTATCTGTTTTGCTCTGCTGGGATGTCTACCTC GCTATTGGTTTCCAAAATGAAAGTGCAAGCAGAAAAGTATGATGTGCCGGTTATTATCAATGCTTACCCAGAAGCGCTGG CATCGGCGCAGGGTGCTCATGCTGATGTGATCCTACTGGGGCCGCAGATCGCCTATATGTTGCCTGAAATAGCCAAAATG TTCCCGAATAAACCCGTCGAAGTGATTGATACGCTTCTTTACGGCAAAGTCGATGGGTTAGGGGTATTAAAAGCTGCGGT GGCCGCAATAAAAAAAGCAAAACAATAA
Upstream 100 bases:
>100_bases GTATACTGCCGACAACCAGAGACAATGGAAGTGAGCTAAGGCGCACAATGAGGTACAGATAAAGGGACGTTTACCATTGC AACTGGCATATCAATAACTT
Downstream 100 bases:
>100_bases GGGGATCACTGTGAGCACATTTATTACGTCGTTGGAGAAGGTCATATTACCCTTCGCCATTAGAATTGGCAGGCAGCAAC ACGTTAATGCCATCAAGAAC
Product: PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB
Products: NA
Alternate protein names: PTS system N,N'-diacetylchitobiose-specific EIIB component [H]
Number of amino acids: Translated: 115; Mature: 114
Protein sequence:
>115_residues MSFEHQKVLGMEKKKIYLFCSAGMSTSLLVSKMKVQAEKYDVPVIINAYPEALASAQGAHADVILLGPQIAYMLPEIAKM FPNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ
Sequences:
>Translated_115_residues MSFEHQKVLGMEKKKIYLFCSAGMSTSLLVSKMKVQAEKYDVPVIINAYPEALASAQGAHADVILLGPQIAYMLPEIAKM FPNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ >Mature_114_residues SFEHQKVLGMEKKKIYLFCSAGMSTSLLVSKMKVQAEKYDVPVIINAYPEALASAQGAHADVILLGPQIAYMLPEIAKMF PNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ
Specific function: The phosphoenolpyruvate-dependent sugar phosphotransferase system (sugar PTS), a major carbohydrate active -transport system, catalyzes the phosphorylation of incoming sugar substrates concomitantly with their translocation across the cell membrane. This
COG id: COG1440
COG function: function code G; Phosphotransferase system cellobiose-specific component IIB
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PTS EIIB type-3 domain [H]
Homologues:
Organism=Escherichia coli, GI1788034, Length=93, Percent_Identity=80.6451612903226, Blast_Score=159, Evalue=5e-41,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014350 - InterPro: IPR003501 - InterPro: IPR013012 [H]
Pfam domain/function: PF02302 PTS_IIB [H]
EC number: =2.7.1.69 [H]
Molecular weight: Translated: 12465; Mature: 12334
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: PS51100 PTS_EIIB_TYPE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 5.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 4.4 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFEHQKVLGMEKKKIYLFCSAGMSTSLLVSKMKVQAEKYDVPVIINAYPEALASAQGAH CCCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCC ADVILLGPQIAYMLPEIAKMFPNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ CEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC >Mature Secondary Structure SFEHQKVLGMEKKKIYLFCSAGMSTSLLVSKMKVQAEKYDVPVIINAYPEALASAQGAH CCCCCHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHCCCCC ADVILLGPQIAYMLPEIAKMFPNKPVEVIDTLLYGKVDGLGVLKAAVAAIKKAKQ CEEEEECCHHHHHHHHHHHHCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]