| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is ccrB [H]
Identifier: 22125148
GI number: 22125148
Start: 1397159
End: 1397569
Strand: Reverse
Name: ccrB [H]
Synonym: y1248
Alternate gene names: 22125148
Gene position: 1397569-1397159 (Counterclockwise)
Preceding gene: 22125149
Following gene: 22125146
Centisome position: 30.38
GC content: 40.88
Gene sequence:
>411_bases GTGATTATGCCGAATCTTATTATCTTAGTCTTTGTCGGTGGTGCTTTTGGTGCCATGTGCCGTGAATTTATTATGCTGTC GGTACCACGTCTGGCTGATGGTTTCCCGATGGATATCTTTGTTGCTAATATTATTGCAGCGTTTCTATTAGGGCTGACAA CCTCTTTCTTTAAGAAAGATAAAATTAACCAGTATGTACATCTGATGGTAGGCACTGGGATTATGGGCGGTCTTTCAACC TTCTCCAGCTTCGTATTTGGCGCAGTAGAAATGATGAAAAATCCTACCGAAGTTTTGGTTTCAATCTGTTATTTAGTCGC CAGTTTGATTGTTGGTTTTATTGCTGTCGAGTTGGGTTTGATGATCGGGCCAAAAGAGAAACCTAAAGATCCACAAGTTG CCTCTGAATAA
Upstream 100 bases:
>100_bases CCGAGGCAGAGCAATTGCCGCCGGATATCTGATTATTTCTGTATTGGTCGGTTTAGCTGCCGCTGCCTTCGGTGCCTGGC TGGCTTACTAATTGGGAGGA
Downstream 100 bases:
>100_bases ATAGCCCATAAAAACCAAGGCTCGTGACAAAAAAAACACCCTCACTTAACCGAGGGTGTTTTGATATAAACACAGTGATA GTGGGCTATTAATGATATCA
Product: camphor resistance protein CrcB
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 136; Mature: 136
Protein sequence:
>136_residues MIMPNLIILVFVGGAFGAMCREFIMLSVPRLADGFPMDIFVANIIAAFLLGLTTSFFKKDKINQYVHLMVGTGIMGGLST FSSFVFGAVEMMKNPTEVLVSICYLVASLIVGFIAVELGLMIGPKEKPKDPQVASE
Sequences:
>Translated_136_residues MIMPNLIILVFVGGAFGAMCREFIMLSVPRLADGFPMDIFVANIIAAFLLGLTTSFFKKDKINQYVHLMVGTGIMGGLST FSSFVFGAVEMMKNPTEVLVSICYLVASLIVGFIAVELGLMIGPKEKPKDPQVASE >Mature_136_residues MIMPNLIILVFVGGAFGAMCREFIMLSVPRLADGFPMDIFVANIIAAFLLGLTTSFFKKDKINQYVHLMVGTGIMGGLST FSSFVFGAVEMMKNPTEVLVSICYLVASLIVGFIAVELGLMIGPKEKPKDPQVASE
Specific function: Not Known. Overproduction Leads To Camphor Resistance And Chromosome Condensation; Deletion Increases Sensibility To Nucleoid Decondensation. Probably Interacts With The Heat-Shock Protein Cspe, Possibly Providing A Way To Anchor The Chromosome To The Mem
COG id: COG0239
COG function: function code D; Integral membrane protein possibly involved in chromosome condensation
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CrcB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003691 [H]
Pfam domain/function: PF02537 CRCB [H]
EC number: NA
Molecular weight: Translated: 14701; Mature: 14701
Theoretical pI: Translated: 5.80; Mature: 5.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 8.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 7.4 %Met (Mature Protein) 8.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIMPNLIILVFVGGAFGAMCREFIMLSVPRLADGFPMDIFVANIIAAFLLGLTTSFFKKD CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KINQYVHLMVGTGIMGGLSTFSSFVFGAVEMMKNPTEVLVSICYLVASLIVGFIAVELGL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MIGPKEKPKDPQVASE HCCCCCCCCCCCCCCC >Mature Secondary Structure MIMPNLIILVFVGGAFGAMCREFIMLSVPRLADGFPMDIFVANIIAAFLLGLTTSFFKKD CCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH KINQYVHLMVGTGIMGGLSTFSSFVFGAVEMMKNPTEVLVSICYLVASLIVGFIAVELGL HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH MIGPKEKPKDPQVASE HCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 11586360; 12142430 [H]