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The map label for this gene is rcsB [C]

Identifier: 22125067

GI number: 22125067

Start: 1311511

End: 1312128

Strand: Direct

Name: rcsB [C]

Synonym: y1164

Alternate gene names: 22125067

Gene position: 1311511-1312128 (Clockwise)

Preceding gene: 22125066

Following gene: 161484846

Centisome position: 28.51

GC content: 35.76

Gene sequence:

>618_bases
ATGGGCATAGCCAAAATGATAAGCTGCATGATAGTCGATAACGATAAATATCAAACATTAGGTATGGTATCTATCGTAAA
AAAAATCTTCACATCCTTAGGATTTAAAAAAGAGATTAAATTCTATCGAAAAGCTTTTTATTCAGCAGATGTGATTTTTA
TTGGCGTCGATGAATTCAGTTTTTTCGAGGCACTCAAACGTCTGGATAAGACCCCCGCAGAAGCGGATGTCTTTTTGATT
TGTGATGCCAGATTGAATAGTTTTTTACAAGGTATTCCAAGATTTAGCGATGTGACCATGATCTTCAGAGAAGACTCATT
GGAAACGGTGAGTAATAAAATCGCTACTGTATTTAAGCGTAAGTTCCGTGGGTTTAAAGACAATTTAATCGAACGTAAAA
CAGCTAAAGTACTTCATCTAGTATCATCTGAGCGTCAATATCTGACACCGAATGAAAATATTGTACTGAAGTTATTCAAT
GAAGGCTTTTCTGGTGGTGATATTGCCAGAATCTTGAAGAAAAGTGAAAAAACAGTCAGTGGACAAAAGCGCTCCGCCAT
GAAGAAACTTGGTGCACGGACTGATGTCGAGTTAATAAAAATGTTTATGTTTAAATAA

Upstream 100 bases:

>100_bases
ATGCATAGGAGTGTGTCTGGTTATCTATATGATATTCAATCGTATTTTATCATATAGCAAACAGATAAGCATCAGGGATT
CACAGAGTGCTTAAGCACTA

Downstream 100 bases:

>100_bases
TTAGCATAAGGATATCTGGGGTTGTCGTTATTTTTATTGTCGACACCAGAGGATGTTATAAGGGACGCTTTTGCATTTGC
AGGCAAGGACGCTTGCGTTA

Product: regulatory protein

Products: NA

Alternate protein names: LuxR Family Regulatory Proteins

Number of amino acids: Translated: 205; Mature: 204

Protein sequence:

>205_residues
MGIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLI
CDARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFN
EGFSGGDIARILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK

Sequences:

>Translated_205_residues
MGIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLI
CDARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFN
EGFSGGDIARILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK
>Mature_204_residues
GIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFSFFEALKRLDKTPAEADVFLIC
DARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKRKFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNE
GFSGGDIARILKKSEKTVSGQKRSAMKKLGARTDVELIKMFMFK

Specific function: Rcsb Is A Member Of The Two-Component Regulatory System Rcsb/Rcsc, Which Regulates The Expression Of Genes Involved In Colanic Acid Capsule Synthesis. Rcsb Acts As The Effector. Additional Control Is Provided By The Dependence On The Alternate Sigma Facto

COG id: COG2771

COG function: function code K; DNA-binding HTH domain-containing proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23505; Mature: 23374

Theoretical pI: Translated: 10.41; Mature: 10.41

Prosite motif: PS50043 HTH_LUXR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFS
CCHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHH
FFEALKRLDKTPAEADVFLICDARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKR
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHH
KFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIARILKKSEKTVS
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
GQKRSAMKKLGARTDVELIKMFMFK
CHHHHHHHHHCCCCHHHHHHHHHCC
>Mature Secondary Structure 
GIAKMISCMIVDNDKYQTLGMVSIVKKIFTSLGFKKEIKFYRKAFYSADVIFIGVDEFS
CHHHHHHHHEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCEEEEECCHHH
FFEALKRLDKTPAEADVFLICDARLNSFLQGIPRFSDVTMIFREDSLETVSNKIATVFKR
HHHHHHHHCCCCCCCCEEEEEHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHH
KFRGFKDNLIERKTAKVLHLVSSERQYLTPNENIVLKLFNEGFSGGDIARILKKSEKTVS
HHCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHC
GQKRSAMKKLGARTDVELIKMFMFK
CHHHHHHHHHCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA