| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Click here to switch to the map view.
The map label for this gene is sphX [H]
Identifier: 22124887
GI number: 22124887
Start: 1109273
End: 1110337
Strand: Direct
Name: sphX [H]
Synonym: y0980
Alternate gene names: 22124887
Gene position: 1109273-1110337 (Clockwise)
Preceding gene: 22124886
Following gene: 22124888
Centisome position: 24.11
GC content: 48.92
Gene sequence:
>1065_bases ATGAAATGGGGAAAACTGGCGCTCTTAAATGTCATTTTATGGCATAGCTATACTGTTTTTGCGCAATCAATAGCTTTAGT ACAGCCAGTGGCTTTAACCCGATCAGTGGCTTTAACTCGATCAGTGGCTTTAGTACTGCCAGTGACGCTAGCCTCTCCCT CAATTACCGTCTCTCCGTCGGTACCAATGCCCGTTGCCAACACCCTATCAGGAAACCTTTCCAGTGTTGGTTCTGACACG TTGGCCAATCTGATGTCATTGTGGGCAAATGATTTCAATCATCACTATCCTGGCGTTAATCTGCAAATACAGGCTGCGGG GTCATCTACCGCTCCTGCTGCGCTGGCTGCCGGGGCAACGCAGCTTGGCCCAATGAGCCGGCCAATGAAAGCTGGCGAGA TTGCTGCTTTTATTCAACGCTATGGCTACCCACCGTTAGCCGTGCCAGTAGCCGTGGATGCGCTAGTGGTGTTTGTTCAT CAGGATAACCCTCTGAATAGGCTGACGTTATCGCAACTGGATGCTATTTTTTCGCAAAATCGCCGTTGTGGAGAACCCCA GAAAATTCAACGCTTCGGTGACTTGGGGTTGAGTGGCGATTGGGCGGCACGCCCCCTACAACGCTATGGTCGTAATTCTG CATCGGGGACGTATGGCTATTTTAAGCGCCGGGTACTCTGTGATGGTGATTTTATAAATAATATCAACGAATTACCCGGA TCTGCATCCGTGGTGCAAGCGGTGGCGGGTTCATTGAATGGCATCGGTTATTCCAGTATTGGTTTTCGTAACAGTGGTGT TAAATCACTGCCGTTGGCAGCGAGTGGGCAAGATTTTGTTATGCCAACTGCAGAAAATGTCAGTAATGGCCTCTATCCGT TATCACGCTATCTCTATATTTATATTAATAAAGCACCAGGGCAGCCGCTGGAAGCACTCACTGCGGCATTTCTTGAGCGT GCGCTATCCCCCGAAGGGCAAAAGTTGGTCAGCCATGACGGCTATTTGCCATTACCGCCTGCTATGTTGAATAACACCCG AAAAACATTGGGTTTTACTGACTAA
Upstream 100 bases:
>100_bases GGGTACCCGTTTTATTTTTACCTTACCGAACAGGTTGATTGTTCCAACTGTTTTAGTCGAGAATGCAGTCAAATCTTAAG ACGGTGCGGATAAAAGCCTA
Downstream 100 bases:
>100_bases TCTGCTCTTTATATGTACTCAAAAGTAGGGTCTATCGCTGTTTCAACCAACAAAAATAATTTTGGGTTATTCCGGTTGAG TGAAATTGATGGAGCCTGTG
Product: phosphate ABC transporter phosphate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 354; Mature: 354
Protein sequence:
>354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD
Sequences:
>Translated_354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD >Mature_354_residues MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPSVPMPVANTLSGNLSSVGSDT LANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGATQLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVH QDNPLNRLTLSQLDAIFSQNRRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYIYINKAPGQPLEALTAAFLER ALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD
Specific function: May be involved in the system for phosphate transport across the cytoplasmic membrane [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell inner membrane. Note=Found in the cytoplasmic membrane in a form that is closely associated with the cell wall [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 - InterPro: IPR006059 [H]
Pfam domain/function: PF01547 SBP_bac_1 [H]
EC number: NA
Molecular weight: Translated: 37755; Mature: 37755
Theoretical pI: Translated: 9.67; Mature: 9.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC VPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGAT CCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCH QLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQN HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCC RRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCC SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEE YINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCHHHCCCCC >Mature Secondary Structure MKWGKLALLNVILWHSYTVFAQSIALVQPVALTRSVALTRSVALVLPVTLASPSITVSPS CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEECCC VPMPVANTLSGNLSSVGSDTLANLMSLWANDFNHHYPGVNLQIQAAGSSTAPAALAAGAT CCCCCHHHCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCHHHHCCCH QLGPMSRPMKAGEIAAFIQRYGYPPLAVPVAVDALVVFVHQDNPLNRLTLSQLDAIFSQN HCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHEEEEEEEECCCCCCHHHHHHHHHHHHCC RRCGEPQKIQRFGDLGLSGDWAARPLQRYGRNSASGTYGYFKRRVLCDGDFINNINELPG CCCCCHHHHHHHHCCCCCCCHHHHHHHHHCCCCCCCCHHHHHHEEEECCHHHHHHHHCCC SASVVQAVAGSLNGIGYSSIGFRNSGVKSLPLAASGQDFVMPTAENVSNGLYPLSRYLYI HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCCHHCCEEEEE YINKAPGQPLEALTAAFLERALSPEGQKLVSHDGYLPLPPAMLNNTRKTLGFTD EEECCCCCHHHHHHHHHHHHHCCCCCCHHHCCCCCCCCCHHHHCCCHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7741855 [H]