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The map label for this gene is ydiY [H]

Identifier: 22124809

GI number: 22124809

Start: 1007565

End: 1008377

Strand: Reverse

Name: ydiY [H]

Synonym: y0899

Alternate gene names: 22124809

Gene position: 1008377-1007565 (Counterclockwise)

Preceding gene: 22124810

Following gene: 22124803

Centisome position: 21.92

GC content: 46.25

Gene sequence:

>813_bases
ATGCGAGCCGCATCACAAACATCATTTTTTCACCATAGGTCCATTATGTTTTCTTTACGTCATACCAAGGCGTTGCCGTT
TTATATCAGCACACTCACTTTATCCTTGTTTAGTGCATCAGCGCTTGCTGATGCGACTCTCTTTACAGCCTTGGATGATC
CTTCCTCGGCTAAAAAAAGCTTTGATGGTTCCGTTGACGCAGGTTATACCGCTCAGTCCGGCAATACGACAAACTCATCA
TTAGCGGCTAACTCAACATTGACTTGGTTCCAGCCCAATACAGCTTATAGCTTATGGGGAGCGGCCCGTAACACCAGCGC
CAATAATCAACGTTCTTCAGAACGTTATCAACTCGGTGGCCGTACCCGCTATAATCTGACGGATCGTCATTACATATTCG
GCCAAGCCAGTTGGCTAACTGATCGTTATAATGGTTTCGACTCCCGCTCGGTATTAACGACAGGTTATGGTCGTCAGGTT
ATGACAACCCCACTACACAATCTGCGGGTAGAATTTGGTCCGGGTGTTCGCCATGATGAATTTTATGGCGGTGGCCGAGC
GACTAAAGCATTAGCATATGGTGGGGCGAACTATACTTATCAGCTCACGGATAACACGGTATTCAGTGAAGGTGTTTCCG
CATTAGCAAACGAAGAAACGACGTTGAACTCAGAAACAGCGTTGAATGTTGCTATCAATAAAAGCTTCGCATTACGTTTA
GCTTATATCGCGACCTATAATACTAAGCCGCCAACCAGTGCGCCCAAAAACACGGACACTACGACGTCAATAACGTTGGT
TTACGGCCTGTAA

Upstream 100 bases:

>100_bases
GGATCATTTTTAAGAATGAACTTATGAGAAAAAGGACGTCATTATAATTAATTACTCAATCCGCTATATCTTCCAAGTAA
GTTTAATCACAACTGCTACA

Downstream 100 bases:

>100_bases
CCCACCATTCGTCTATATAGCGTGGTGTGATACCGCGCTAATTCTCCTCTCTGCCTTTTCCTTGTCTTAATACCTAATAT
TCATTTCTCAAGAGTATTTA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 270

Protein sequence:

>270_residues
MRAASQTSFFHHRSIMFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGNTTNSS
LAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQV
MTTPLHNLRVEFGPGVRHDEFYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRL
AYIATYNTKPPTSAPKNTDTTTSITLVYGL

Sequences:

>Translated_270_residues
MRAASQTSFFHHRSIMFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGNTTNSS
LAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQV
MTTPLHNLRVEFGPGVRHDEFYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRL
AYIATYNTKPPTSAPKNTDTTTSITLVYGL
>Mature_270_residues
MRAASQTSFFHHRSIMFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKSFDGSVDAGYTAQSGNTTNSS
LAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGGRTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQV
MTTPLHNLRVEFGPGVRHDEFYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRL
AYIATYNTKPPTSAPKNTDTTTSITLVYGL

Specific function: Unknown

COG id: COG3137

COG function: function code M; Putative salt-induced outer membrane protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788016, Length=252, Percent_Identity=53.1746031746032, Blast_Score=284, Evalue=4e-78,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007433 [H]

Pfam domain/function: PF04338 DUF481 [H]

EC number: NA

Molecular weight: Translated: 29517; Mature: 29517

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRAASQTSFFHHRSIMFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKS
CCCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHH
FDGSVDAGYTAQSGNTTNSSLAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGG
CCCCCCCCEEECCCCCCCCCEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHEECCC
RTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPGVRHDE
CEEECCCCCEEEEEEHHEHHHHCCCCCCCEEEEECCCCEEEECCHHHEEEEECCCCCCCC
FYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRL
CCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEE
AYIATYNTKPPTSAPKNTDTTTSITLVYGL
EEEEEECCCCCCCCCCCCCCCEEEEEEEEC
>Mature Secondary Structure
MRAASQTSFFHHRSIMFSLRHTKALPFYISTLTLSLFSASALADATLFTALDDPSSAKKS
CCCCCCCHHHHHHHEEEEECCCCCCCHHHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHH
FDGSVDAGYTAQSGNTTNSSLAANSTLTWFQPNTAYSLWGAARNTSANNQRSSERYQLGG
CCCCCCCCEEECCCCCCCCCEECCCEEEEECCCCCEEEECCCCCCCCCCCCCCHHEECCC
RTRYNLTDRHYIFGQASWLTDRYNGFDSRSVLTTGYGRQVMTTPLHNLRVEFGPGVRHDE
CEEECCCCCEEEEEEHHEHHHHCCCCCCCEEEEECCCCEEEECCHHHEEEEECCCCCCCC
FYGGGRATKALAYGGANYTYQLTDNTVFSEGVSALANEETTLNSETALNVAINKSFALRL
CCCCCCCEEEEEECCCCEEEEEECCCCHHHHHHHHCCCCCCCCCCEEEEEEECCCEEEEE
AYIATYNTKPPTSAPKNTDTTTSITLVYGL
EEEEEECCCCCCCCCCCCCCCEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]