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The map label for this gene is ytfJ [H]

Identifier: 22124569

GI number: 22124569

Start: 737982

End: 738620

Strand: Reverse

Name: ytfJ [H]

Synonym: y0655

Alternate gene names: 22124569

Gene position: 738620-737982 (Counterclockwise)

Preceding gene: 22124571

Following gene: 22124567

Centisome position: 16.05

GC content: 45.38

Gene sequence:

>639_bases
TTGAAAAACTTACCTACTTTCAGGGGTAAGTGCCCTACGTCATTATCTACGCGGATATCTCTACAAGGACATAATATGAT
AAAAAATAGCCTGCTTATAATATCGCTGATATTCACACCGCTACTGGTATCGGCCCATAACATTCAGGACAACCAACGCG
TGCCGCCAGTTGGTGTCCGCGATAAAGGTGAGTTGGATTATGATAAGACCACCAATCAGTTTAACTATAAAAACTGGAAT
AGCTCACAATTGCCCGGCAAAACCCGCGTCATTCAACACATTGCTGGCCGTACCTCAGCCAAAGAAATGAATGCCCCGCT
GATTGATGCCATCAAGCAAGCCAATCTGCCACGCGAACGTTACCAAACGACGACCATCGTCAATACTGATGATGCAATCA
TCGGGACAGCCATGTTTGTGCGTAACAGCATTGAAAGCAGTAAACGTGAATTTCCTTGGTCGCAATTTATTATCGACAGT
AAGGGAAATGTGGCAAAAGCTTGGGGGGTAACGGAGAAAAGCTCTGCCATTGTGGTGCTGGATCCACAAGGAAATGTCAA
ATTTGTAAAAGATGGAGCACTGACATCAGCAGAGGTGCAGCAGGTCATCGACCAACTGCACCAACTTGTGCAGCAATAA

Upstream 100 bases:

>100_bases
AGGCAGCAAAAATGAGACTTAACAACAGAATAACCTTCTAATAATTATTAGAAATTAATTAGACTACTAAACAGGACAGA
CCTCTGATCTGGACCTATTA

Downstream 100 bases:

>100_bases
CGCTAAAATAACGAAACTCTGAAACCGGGGTTCAAGAAAGATTCACGTGGGGTATAAGACAGTGTCTTTCCCTGCCAATC
GTGTACTTGCGCCCCGGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 212; Mature: 212

Protein sequence:

>212_residues
MKNLPTFRGKCPTSLSTRISLQGHNMIKNSLLIISLIFTPLLVSAHNIQDNQRVPPVGVRDKGELDYDKTTNQFNYKNWN
SSQLPGKTRVIQHIAGRTSAKEMNAPLIDAIKQANLPRERYQTTTIVNTDDAIIGTAMFVRNSIESSKREFPWSQFIIDS
KGNVAKAWGVTEKSSAIVVLDPQGNVKFVKDGALTSAEVQQVIDQLHQLVQQ

Sequences:

>Translated_212_residues
MKNLPTFRGKCPTSLSTRISLQGHNMIKNSLLIISLIFTPLLVSAHNIQDNQRVPPVGVRDKGELDYDKTTNQFNYKNWN
SSQLPGKTRVIQHIAGRTSAKEMNAPLIDAIKQANLPRERYQTTTIVNTDDAIIGTAMFVRNSIESSKREFPWSQFIIDS
KGNVAKAWGVTEKSSAIVVLDPQGNVKFVKDGALTSAEVQQVIDQLHQLVQQ
>Mature_212_residues
MKNLPTFRGKCPTSLSTRISLQGHNMIKNSLLIISLIFTPLLVSAHNIQDNQRVPPVGVRDKGELDYDKTTNQFNYKNWN
SSQLPGKTRVIQHIAGRTSAKEMNAPLIDAIKQANLPRERYQTTTIVNTDDAIIGTAMFVRNSIESSKREFPWSQFIIDS
KGNVAKAWGVTEKSSAIVVLDPQGNVKFVKDGALTSAEVQQVIDQLHQLVQQ

Specific function: Unknown

COG id: COG3054

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: To H.influenzae HI_0045 [H]

Homologues:

Organism=Escherichia coli, GI1790662, Length=186, Percent_Identity=59.1397849462366, Blast_Score=233, Evalue=1e-62,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006513 [H]

Pfam domain/function: PF09695 YtfJ_HI0045 [H]

EC number: NA

Molecular weight: Translated: 23642; Mature: 23642

Theoretical pI: Translated: 10.24; Mature: 10.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNLPTFRGKCPTSLSTRISLQGHNMIKNSLLIISLIFTPLLVSAHNIQDNQRVPPVGVR
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DKGELDYDKTTNQFNYKNWNSSQLPGKTRVIQHIAGRTSAKEMNAPLIDAIKQANLPRER
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCHHH
YQTTTIVNTDDAIIGTAMFVRNSIESSKREFPWSQFIIDSKGNVAKAWGVTEKSSAIVVL
HCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEECCCCCCCCEEEEE
DPQGNVKFVKDGALTSAEVQQVIDQLHQLVQQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC
>Mature Secondary Structure
MKNLPTFRGKCPTSLSTRISLQGHNMIKNSLLIISLIFTPLLVSAHNIQDNQRVPPVGVR
CCCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
DKGELDYDKTTNQFNYKNWNSSQLPGKTRVIQHIAGRTSAKEMNAPLIDAIKQANLPRER
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHCCHHHHHHHHCCCCHHH
YQTTTIVNTDDAIIGTAMFVRNSIESSKREFPWSQFIIDSKGNVAKAWGVTEKSSAIVVL
HCEEEEECCCCHHHHHHHHHHHHHHHHHHCCCHHHEEEECCCCEEEECCCCCCCCEEEEE
DPQGNVKFVKDGALTSAEVQQVIDQLHQLVQQ
CCCCCEEEEECCCCCHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 7764507; 9298646; 10493123 [H]