| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124466
Identifier: 22124466
GI number: 22124466
Start: 619178
End: 620035
Strand: Reverse
Name: 22124466
Synonym: y0552
Alternate gene names: NA
Gene position: 620035-619178 (Counterclockwise)
Preceding gene: 22124467
Following gene: 22124465
Centisome position: 13.48
GC content: 49.88
Gene sequence:
>858_bases TTGAACAGCTTCGCACGGTGGCACCTTGTGTGGAGGTTATTGCTTATGAATAAGCCTGTTTTTTTGTGTGATCTGGACGA TACGCTGTTCCAGACACGGCGCAAAATGGTCGATGAGCTAGACCTTCCTCCTTTTCGGGTAGGGGCGTTGGATCGCAGCC TGACACCCCGCAGTTTCATGACCGAAGAGCAGTCCATGTTGGTGGATTGGCTCTTGGAGCACGCAGAATTTATCCCCGTG ACCGCCCGTGGAACAGAAGAGATCAGCCGCGTCAACATTCCTTTCAGCTCATGGGCGATCACCACCCATGGTGCCGTTAT TCTGACGCCCGACAGACAACCCGATGCCGGCTGGCAGGATACGGTGCTGACGAACTTGCAGCCCTATCGTGACCGTTTGA TAGCAATGGAAAGCCGTATCAATGACATGATGGCCGAACGGGGTCTGAATGCCTGGTGTCGAATCAATTATGAATACGGC GACACCCCGGTTTATTTCGTGATGAAACACCGTGATAGCACACAGATAGCCGAGTTGTATGCCTTCAACGACCAACTGGA ATCCCTCTTTTCCACTGATGGATTTTATATTCACCGTAACAGCAACAATATTGCGTGGTTACCGGTTTGTATCGAAAAAG GCCTGGCGACCACTTATCTGCTTGATAAATTACGCCACGAACATGGCGCGTTTCCGGTTCTGGGTTTCGGCGATAGCCTG AGCGACTTCAGCTTTATGCGCCACTGTCATTGGTTCGGTATGCCCGCGAAAAGTCAGTTCTCGCAGGCCCTGACATCGCA TTTATTTGATAACACGACATTTAATAAAAATAATGTTAATGGAGATAACGATGCATGA
Upstream 100 bases:
>100_bases CTAGGGATCCCCAATTTCCTCTATAACGTCGCTCATCAGCATTTTGATCGCATTATCGTTTGTGTCGAAACACCAGCCGA ATCTATTGATCCCACACTGA
Downstream 100 bases:
>100_bases CATTACGCCTTTTTCTGGCTCCTATTTGCCAGATGACATTCAATTTCTGCTCAAACCAATACAAATTGAAATGACACCGG TCGAGGTTAAAGAGAAACTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 285; Mature: 285
Protein sequence:
>285_residues MNSFARWHLVWRLLLMNKPVFLCDLDDTLFQTRRKMVDELDLPPFRVGALDRSLTPRSFMTEEQSMLVDWLLEHAEFIPV TARGTEEISRVNIPFSSWAITTHGAVILTPDRQPDAGWQDTVLTNLQPYRDRLIAMESRINDMMAERGLNAWCRINYEYG DTPVYFVMKHRDSTQIAELYAFNDQLESLFSTDGFYIHRNSNNIAWLPVCIEKGLATTYLLDKLRHEHGAFPVLGFGDSL SDFSFMRHCHWFGMPAKSQFSQALTSHLFDNTTFNKNNVNGDNDA
Sequences:
>Translated_285_residues MNSFARWHLVWRLLLMNKPVFLCDLDDTLFQTRRKMVDELDLPPFRVGALDRSLTPRSFMTEEQSMLVDWLLEHAEFIPV TARGTEEISRVNIPFSSWAITTHGAVILTPDRQPDAGWQDTVLTNLQPYRDRLIAMESRINDMMAERGLNAWCRINYEYG DTPVYFVMKHRDSTQIAELYAFNDQLESLFSTDGFYIHRNSNNIAWLPVCIEKGLATTYLLDKLRHEHGAFPVLGFGDSL SDFSFMRHCHWFGMPAKSQFSQALTSHLFDNTTFNKNNVNGDNDA >Mature_285_residues MNSFARWHLVWRLLLMNKPVFLCDLDDTLFQTRRKMVDELDLPPFRVGALDRSLTPRSFMTEEQSMLVDWLLEHAEFIPV TARGTEEISRVNIPFSSWAITTHGAVILTPDRQPDAGWQDTVLTNLQPYRDRLIAMESRINDMMAERGLNAWCRINYEYG DTPVYFVMKHRDSTQIAELYAFNDQLESLFSTDGFYIHRNSNNIAWLPVCIEKGLATTYLLDKLRHEHGAFPVLGFGDSL SDFSFMRHCHWFGMPAKSQFSQALTSHLFDNTTFNKNNVNGDNDA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32997; Mature: 32997
Theoretical pI: Translated: 5.54; Mature: 5.54
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNSFARWHLVWRLLLMNKPVFLCDLDDTLFQTRRKMVDELDLPPFRVGALDRSLTPRSFM CCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHH TEEQSMLVDWLLEHAEFIPVTARGTEEISRVNIPFSSWAITTHGAVILTPDRQPDAGWQD HHHHHHHHHHHHHHHHEEEEECCCCHHHHEECCCCCCEEEEECCEEEECCCCCCCCCCCH TVLTNLQPYRDRLIAMESRINDMMAERGLNAWCRINYEYGDTPVYFVMKHRDSTQIAELY HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHH AFNDQLESLFSTDGFYIHRNSNNIAWLPVCIEKGLATTYLLDKLRHEHGAFPVLGFGDSL HHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCH SDFSFMRHCHWFGMPAKSQFSQALTSHLFDNTTFNKNNVNGDNDA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MNSFARWHLVWRLLLMNKPVFLCDLDDTLFQTRRKMVDELDLPPFRVGALDRSLTPRSFM CCCHHHHHHHHHHHHHCCCEEEEECCHHHHHHHHHHHHHCCCCCEEECCCCCCCCCHHHH TEEQSMLVDWLLEHAEFIPVTARGTEEISRVNIPFSSWAITTHGAVILTPDRQPDAGWQD HHHHHHHHHHHHHHHHEEEEECCCCHHHHEECCCCCCEEEEECCEEEECCCCCCCCCCCH TVLTNLQPYRDRLIAMESRINDMMAERGLNAWCRINYEYGDTPVYFVMKHRDSTQIAELY HHHHCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEECCCEEEEEEECCCCHHHHHHH AFNDQLESLFSTDGFYIHRNSNNIAWLPVCIEKGLATTYLLDKLRHEHGAFPVLGFGDSL HHHHHHHHHHCCCCEEEEECCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCEEEECCCCH SDFSFMRHCHWFGMPAKSQFSQALTSHLFDNTTFNKNNVNGDNDA HHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA