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The map label for this gene is 22124430

Identifier: 22124430

GI number: 22124430

Start: 587066

End: 588292

Strand: Direct

Name: 22124430

Synonym: y0515

Alternate gene names: NA

Gene position: 587066-588292 (Clockwise)

Preceding gene: 22124429

Following gene: 22124431

Centisome position: 12.76

GC content: 46.78

Gene sequence:

>1227_bases
ATGCAGGGGAATAACATGACCACCGTATTCAAGCTTCGCCTGTTAAATGGTGATCTCAATGGTCTTGAGCTGATATTACC
GGAAGGTGAATTTACACTGGGGGAGCAGGGGTGTGATGTTCTGCTGCCTTTATCTGACGGCAATATAGTGACGCTATGTG
TTAATGAATATCAGGTAATGATACAGGTGGCGGAGGAGGTTTGGATTAATGGTGCACAGCACGATTTACACACTCCCCTT
CCACTGTTGCAATCTATTGAAATTGCCGGATTGGTATTCGTTCTGGGTGAACAAACGGATATTTTGAGTGGAATTAAAGT
CACTCACCGTGCGAGGTTCCCTTTATTGGTATGGCTAGCTATTGCGATATGTGTCCCCTTATCACTGCTGTTTGTTTTTT
TATTTTGGTTAACCACTCAGCCTGAGACATTACGTGCTTCGATTCCTGCGGATGTCCCGACGCAATTAGCCGAACGCCTG
CGCGAACCCGCTTTACAGGGAATAAAGGGAACCTGGCTAGCGGATGGGAGTGTCACATTAAGTGGGCATTGTGCCTCGTC
CTCAATGATGGAACCACTGCAACATTTTTTACTGCGTAACCATATCGCCTTTCGTAACCAATTGGTGTGTGATGATCGCT
TAATCGCTTCCGTTAGCGATCTATTACATCAGCATGGTTACCACGATATTGAGGTGCGCATCGGTGATGAACCGGGAAAT
ATTGTGATTTATGGTGCCGTTCAAATGGGTGATCAGTGGTTAACCGTGCAGGACACGCTGGCGGCGGTCTCAGGGTTGAA
AGGTTGGCTGGTGGTTAATGCTCATTCAGGGCAAATACAACAACTGGTGGAGCGCTTGAGAGCGGCAGGCTTATTAGGAT
TCTTAAGCATGACGGAAAGTAATAAAGAGTTGGCCATCAGTGGTGTGCTGTCATCTGAACAGCAGCAGTTAAAGGAGACA
TTGGCCGCTTTATCTCAGCAGCAACCCGGTTTTCCGTCAGTCAGGTATCAGAATATTCCGGCGTCAGACCGAACGGATCA
ATTTCTTCCGGCAAAGGTCGTGAGCTATGGAGGAAATACCCAGTCGGCATTTGTGCGGTTAGCCAATGGTGGGCGTTTGC
AGCAAGGGAGTGTGTTGGCAAATGGCTATAAAGTGGTTTTTATTGGGGAACAGGGACTGACGTTATTAAAAGCAAATAAT
TTAGTACATATCCCCATGGATTTCTAA

Upstream 100 bases:

>100_bases
TTACTGGGCGATATTCCGCTATTAGGTGGGTTGTTCCGTAGTACAGATAAACAATCTCACAGCGTGGTCAGACTCTTCCT
GATCAAGGCCGTTCCGGTTA

Downstream 100 bases:

>100_bases
GGTTCAGGAGTAACGGAAATGCAGCATATTACTGTGCTGGAGGAGGATATTAAACATGACCCTACAGCGATCAAACAAAG
AAAAGAGATATTGGCGAGAG

Product: type III secretion system component

Products: NA

Alternate protein names: Type III Secretion Apparatus Protein; Type III Secretion Apparatus Protein YscD/HrpQ Family; YscD/HrpQ Family Type III Secretion Apparatus Protein; Type III Secretion Apparatus; Type III Export Protein PscD; Pathogenicity Island Protein

Number of amino acids: Translated: 408; Mature: 408

Protein sequence:

>408_residues
MQGNNMTTVFKLRLLNGDLNGLELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVMIQVAEEVWINGAQHDLHTPL
PLLQSIEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLAIAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERL
REPALQGIKGTWLADGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGN
IVIYGAVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTESNKELAISGVLSSEQQQLKET
LAALSQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNTQSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANN
LVHIPMDF

Sequences:

>Translated_408_residues
MQGNNMTTVFKLRLLNGDLNGLELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVMIQVAEEVWINGAQHDLHTPL
PLLQSIEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLAIAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERL
REPALQGIKGTWLADGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGN
IVIYGAVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTESNKELAISGVLSSEQQQLKET
LAALSQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNTQSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANN
LVHIPMDF
>Mature_408_residues
MQGNNMTTVFKLRLLNGDLNGLELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVMIQVAEEVWINGAQHDLHTPL
PLLQSIEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLAIAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERL
REPALQGIKGTWLADGSVTLSGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGN
IVIYGAVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTESNKELAISGVLSSEQQQLKET
LAALSQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNTQSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANN
LVHIPMDF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44640; Mature: 44640

Theoretical pI: Translated: 5.18; Mature: 5.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGNNMTTVFKLRLLNGDLNGLELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVM
CCCCCEEEEEEEEEECCCCCCEEEEECCCCEEECCCCCCEEEEECCCCEEEEEECHHHHH
IQVAEEVWINGAQHDLHTPLPLLQSIEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHCCCEEECCCCCHHHHHHH
IAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERLREPALQGIKGTWLADGSVTL
HHHHHHHHHHHHHHHHHCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEE
SGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGN
ECCCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHCCCEEEEEEECCCCCC
IVIYGAVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTES
EEEEEEEECCCEEEEHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHEECCC
NKELAISGVLSSEQQQLKETLAALSQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNT
CCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCC
QSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANNLVHIPMDF
CEEEEEECCCCCEECCCEEECCEEEEEECCCCEEEEEECCEEEEECCC
>Mature Secondary Structure
MQGNNMTTVFKLRLLNGDLNGLELILPEGEFTLGEQGCDVLLPLSDGNIVTLCVNEYQVM
CCCCCEEEEEEEEEECCCCCCEEEEECCCCEEECCCCCCEEEEECCCCEEEEEECHHHHH
IQVAEEVWINGAQHDLHTPLPLLQSIEIAGLVFVLGEQTDILSGIKVTHRARFPLLVWLA
HHHHHHHHCCCCCCCCCCCHHHHHHHHHEEEEEEECCCHHHHCCCEEECCCCCHHHHHHH
IAICVPLSLLFVFLFWLTTQPETLRASIPADVPTQLAERLREPALQGIKGTWLADGSVTL
HHHHHHHHHHHHHHHHHCCCCHHHEECCCCCCHHHHHHHHHHHHHHCCCCEEEECCEEEE
SGHCASSSMMEPLQHFLLRNHIAFRNQLVCDDRLIASVSDLLHQHGYHDIEVRIGDEPGN
ECCCCCHHHHHHHHHHHHHHHHHHHCCEEECHHHHHHHHHHHHHCCCEEEEEEECCCCCC
IVIYGAVQMGDQWLTVQDTLAAVSGLKGWLVVNAHSGQIQQLVERLRAAGLLGFLSMTES
EEEEEEEECCCEEEEHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHHHCCHHHHHEECCC
NKELAISGVLSSEQQQLKETLAALSQQQPGFPSVRYQNIPASDRTDQFLPAKVVSYGGNT
CCEEEEEEHHHHHHHHHHHHHHHHHCCCCCCCCCEECCCCCCCCCCCCCCHHHHHCCCCC
QSAFVRLANGGRLQQGSVLANGYKVVFIGEQGLTLLKANNLVHIPMDF
CEEEEEECCCCCEECCCEEECCEEEEEECCCCEEEEEECCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA