| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124360
Identifier: 22124360
GI number: 22124360
Start: 495883
End: 496713
Strand: Direct
Name: 22124360
Synonym: y0445
Alternate gene names: NA
Gene position: 495883-496713 (Clockwise)
Preceding gene: 161484894
Following gene: 22124361
Centisome position: 10.78
GC content: 46.81
Gene sequence:
>831_bases ATGACGATGACGACCTTCTCTCATCCCTCCCTGATCCCACTGGATGGCGGTATTAACTTTCGTGATCTCGGGGGTAACCT TGCCGCTGATGGCCGGCGGATAAAGCCCGGCTTGTTATTTCGTTCCGGTTCGCTTGATCGCTTGAGTACCAACGATTGTG ATTTTCTCAGTCACAGTAACGTTACCCAAATTATTGATTACCGTGATGCCGATGAAGTACAGGCTAAGCCAGATGTTTTA TGGCCGGGTGCCCACTATCACAATATACCGGCCAACCCGCTCAGTAGTGAGGTGAATGCCAATCTGGAAAAATTGACTAA CGAGACATTAGCCACATTTGATGTCCGTGCCTTTATGTTCGAGCTTTATCACCGCTTACCTTTTAATAGCTTGGCTTATC AGCAATTGGTCAATTTATTGCAAAATTGTGCATCAACGGACCCTGTCGCTAGCAGCGTTGTGCATAGTGGCGATGTGGTA CATAGAGGTATTGTACAGCACTGTGCGGTTGGAAAAGACCGCACGGGTGTAGGTGCTGCGTTGGTACTGTTTGCTTTGGG GGCTGATGAATCTACTGTGCTGGAAGATTATCTGTTGACGGAAACCACCCTGAAGCCTTTTCGTGAGCATATGCTGGCTG AATTGGCACTAAAACTGAATGATCAGGCTCTGGCGCAATTTACATTTGTTCTCTCTGCCAGAGAAGAGTTTATTCAAACT ACGCTGCGGAGCATTCATGAGCGTTATGGAAGCAGGGAGCGTTGGTTAAAGCATGAGTTCGGTCTTGGCAGTATTGAGCG TGAAAAACTACAGTCTTATTTTTTAGAGTAA
Upstream 100 bases:
>100_bases GAGGGTTTGTTCTCGGGTCAGTTTACTGGCCCGTTCTTTATTTCATCTGATTATCTGATAAGGTCACAGCTCTTATAACG AACAATAATAAGAGGAAAAT
Downstream 100 bases:
>100_bases CGGGTTATTTTTTATGACATTCGTTTTTTAGCATAATGCGTTACCTCTTGCCTTTTATTTGGTCCAGGCGAAGAGTTGGA GTCGGTACCCCCGTATTTTC
Product: hypothetical protein
Products: NA
Alternate protein names: Protein-Tyrosine Phosphatase; Protein Tyrosine Phosphatase; Serine/Tyrosine Protein Phosphatase; Protein-Tyrosine-Phosphatase; Tyrosine Protein Phosphatase; Phosphotyrosine Protein Phosphatase Ptpb; Tyrosine/Serine Phosphatase; Conventional Protein Tyrosine Phosphatase; Tyrosine Phosphatase; Phosphotyrosine Protein Phosphatase; Tyrosine Specific Protein Phosphatase
Number of amino acids: Translated: 276; Mature: 275
Protein sequence:
>276_residues MTMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVL WPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVV HRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFVLSAREEFIQT TLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE
Sequences:
>Translated_276_residues MTMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVL WPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVV HRGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFVLSAREEFIQT TLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE >Mature_275_residues TMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSNVTQIIDYRDADEVQAKPDVLW PGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMFELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVH RGIVQHCAVGKDRTGVGAALVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFVLSAREEFIQTT LRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE
Specific function: Unknown
COG id: COG2365
COG function: function code T; Protein tyrosine/serine phosphatase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 30891; Mature: 30760
Theoretical pI: Translated: 5.74; Mature: 5.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSN CCCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC VTQIIDYRDADEVQAKPDVLWPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMF HHHHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHH ELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHRGIVQHCAVGKDRTGVGAA HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHH LVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFVLSAREEFIQT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE HHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCC >Mature Secondary Structure TMTTFSHPSLIPLDGGINFRDLGGNLAADGRRIKPGLLFRSGSLDRLSTNDCDFLSHSN CCCCCCCCCEEEECCCCCHHCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCCCCCC VTQIIDYRDADEVQAKPDVLWPGAHYHNIPANPLSSEVNANLEKLTNETLATFDVRAFMF HHHHHCCCCCHHHCCCCCEECCCCCCCCCCCCCCCHHHHCHHHHHHHHHHHHHHHHHHHH ELYHRLPFNSLAYQQLVNLLQNCASTDPVASSVVHSGDVVHRGIVQHCAVGKDRTGVGAA HHHHHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHCCCCCCCHHHH LVLFALGADESTVLEDYLLTETTLKPFREHMLAELALKLNDQALAQFTFVLSAREEFIQT HHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH TLRSIHERYGSRERWLKHEFGLGSIEREKLQSYFLE HHHHHHHHHCCHHHHHHHHCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA