| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124347
Identifier: 22124347
GI number: 22124347
Start: 479296
End: 481644
Strand: Reverse
Name: 22124347
Synonym: y0432
Alternate gene names: NA
Gene position: 481644-479296 (Counterclockwise)
Preceding gene: 22124348
Following gene: 22124346
Centisome position: 10.47
GC content: 47.94
Gene sequence:
>2349_bases GTGGAATGGAATCCTATGGCCTATTATTCAAAAATTAATCATAGCTTACTTTTTACTTTAGCCTTATTCACACTAAAGCT CGCTCATGCAGAAGCAGTTAAAATAGAGTATTTAGTGCCAATGGGGTTTTCCGCGGCTGAAGAGAACAACTCACTTCAGT TATTAGGGGTATTAGACAGTAAGACATTGCCCAGTCCTATTACCTTCTCAGAAGAAGAACAACAACTGCAATTTAATCAA CAAAACTATCGACATAATAATATTAGTGAAGAATCTATTATTTTATTGGGAGAGATATTATCTCAAATACCGTATTTACA GTGTAAAACCGGCTGTGATTATACTTTATCGGGTCACCGCGTGGCGTTAGATAAAGTGAATAACACATTGACGATCACCA ATAATAATAATCGTTATCTGATGCCAACCACGACATGGGGGTTGGTCAGCAATCAATCTCTCGATTTGCGAATGACAGCA GCCCACTATCGGGCGATGTCAGTCCGTGGTCAAAGTTACATCGGCTTGCCATGGCAATCTTATGGCTTTGCATCTTGGTT TTATAACGCGATTCAGTCACAAAATACGCTGCAATCACAGAACACCATGCCATCGCAGAGCACCTATCAGCCCGTTAATC GCCCTCAGTATCAGCGCCTAACCCAAAAAGGGATCGGCAGTTGGTATTTGCAAAAGAACTTCTCGGCACTCTATTTACGC ACCGGTCGGCAAAACAACCTGGATAACAACGCAGGTAGCGTTCACACCCTGATCAACCCTGCGTTGGACCAATTTGTAAC ACTCGGTAGTCAAAGCTATCTGGCCATCGATAAGCCTTCCACCGGCAGTATCGTGCTCTATGCCGCTCAAGATGGTGACT ACGAAATATACCGCGATAATCAGCTCATTCGCCGCATCCCCGCTCAATTGGGTCGCAACGAGATAGATTACAGCCAACTA CCAGGGGGCTATTACAACGTTGAGATTCGTTTAGTTGATCGTCTTGGGCGGATCGTCAGCCAGGAAAACCAAACCATCAG CAATATTGGTAATCAGACCAATAATGGTTGGTTTCTGACAATGGGCAAAGGGCCTGCAAAGGGTAAAAAAACGCCCCGTT TAGTCCAGTTTGGACGCAGCAGGGTGATAGAAAGCGTACAAACCAATATCACGCTACTCAAAGATGATGCCCATCACTGG GCCGTGGAAGCGAACGTCTCACGCCCTTTAAGCCTCAATAAGGTGAATATCACCCCAACAGGGGGCTTGATGTCAGGAGA GAAACGCAGTGGAGGTTACGTTCGCTTAAATGGCGGCAACAATACACTGGGTTACTTTTCATTAGCTCGCTATCAGTCAC CTTATGTCTCGCGATACGCACCTGACTCTGGCAGTACCTCAGGCTCCTATACCCGGCGTATTGGGCCAACCCAGCTAAGT TATCAATTCAATCAGTACCGCAATAACCGGCAACACCGTATCCAAAGTGGTTGGGACTGGCAATTACCACAATTTAACCT CGCGTTATCCCTTGGGCTGCAAAATGGTGGGCAATGGAACAGCCACAATAATTACGGCGTCTTCCTGAACACCACCCTGT CCTTCGGCCAAAGTAACGCCAGCATCAATACGGCTTATACCCAACAACAGTTGAATACCAGCGCCAGTTACCAGAAAGAG TTTATTGATAACTATGGGGCCAGCACTTTGGGTGTCAGTGGTAGTGCCAGCGGGAAACTAAATAGCGTCGGCGGTTTTGC TAAACGCAGCGGGAGCCGGGGGGATATCTCTGGCCGGGTAGGCATTGATAACCAGATAACCAACGGGGGGATTAGCTATA ACGGCATGTTGGCACTCAGCTCACAGGGGGTTGCCTTGGGGCGCAGCAGTTATAGCGGAGCGGCACTCTTGATCAAAGCC CCCGCTCTGGGCGGCACCCCCTATAGTTTTCATGTGGAGGATAGCCCAATAACCGGTGGTGGCACCTATGCGATACCGGT CCCCCGCTACCAAGACCGTTTCTTTGTCCGTACTCACACCGACCGCAGTGATATGGATATGAATATTCAACTGCCGGTCA ATATTGTACGCGCTCACCCTGGGCAAGTTTTTTCAGGCGAAGCTGACATCACATTAAATCTGCTATACAGCGGTTTTCTC AAGAATGCACAAGGGCTACCGGTGAGCGGGGTGATTGAGGAGACGGGTGATACCGCTTATCCCAATGGGCTGTTTTCCAT TAACGCCCAAAATAGGCTGCAAGCGATAACCGTCCATGGCCCCTCTGGCCGTTACCGCTGTGATATGCACTCGCAACCTA CTCATATTTACCTTTGCCACGCCGATTAA
Upstream 100 bases:
>100_bases CTCAGTTGTCGACGTCCTGCAATTCGAATTATTTTGGGTATATACACAAATTATTTCTTTTAAAAATAAATAATTATCCT GTAAAACCACCATAATTATA
Downstream 100 bases:
>100_bases TACCGATAGGAACCTTCATGAAATACCTTTATTCGATACTCAGCATCGCGCTGTTACTGGCCCCCGGTTCTGCCACTCAC GGCCAACTGCTTGCTACCCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 782; Mature: 782
Protein sequence:
>782_residues MEWNPMAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEEQQLQFNQ QNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTA AHYRAMSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLR TGRQNNLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQL PGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHW AVEANVSRPLSLNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLS YQFNQYRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKE FIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKA PALGGTPYSFHVEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFL KNAQGLPVSGVIEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD
Sequences:
>Translated_782_residues MEWNPMAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEEQQLQFNQ QNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTA AHYRAMSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLR TGRQNNLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQL PGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHW AVEANVSRPLSLNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLS YQFNQYRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKE FIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKA PALGGTPYSFHVEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFL KNAQGLPVSGVIEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD >Mature_782_residues MEWNPMAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDSKTLPSPITFSEEEQQLQFNQ QNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHRVALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTA AHYRAMSVRGQSYIGLPWQSYGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLR TGRQNNLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDNQLIRRIPAQLGRNEIDYSQL PGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLTMGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHW AVEANVSRPLSLNKVNITPTGGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLS YQFNQYRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNASINTAYTQQQLNTSASYQKE FIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRVGIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKA PALGGTPYSFHVEDSPITGGGTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFL KNAQGLPVSGVIEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCHAD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86574; Mature: 86574
Theoretical pI: Translated: 9.38; Mature: 9.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEWNPMAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDS CCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECC KTLPSPITFSEEEQQLQFNQQNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHR CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCEEECCCCCEEECCCE VALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQS EEEEECCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCC YGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLR CCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEE TGRQNNLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDN CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECC QLIRRIPAQLGRNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLT HHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEE MGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPT ECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCC GGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLS CCCCCCCCCCCCEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEE YQFNQYRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNA EEHHHHCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCC SINTAYTQQQLNTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRV EEEEHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEE GIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGG CCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCC GTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFL CEEEEECCCCCCEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEHHHHH KNAQGLPVSGVIEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCH CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEE AD CC >Mature Secondary Structure MEWNPMAYYSKINHSLLFTLALFTLKLAHAEAVKIEYLVPMGFSAAEENNSLQLLGVLDS CCCCCCHHHHHHCHHHHHHHHHHHHHHHCCCEEEEEEEECCCCCCCCCCCCEEEEEEECC KTLPSPITFSEEEQQLQFNQQNYRHNNISEESIILLGEILSQIPYLQCKTGCDYTLSGHR CCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHCCCEEECCCCCEEECCCE VALDKVNNTLTITNNNNRYLMPTTTWGLVSNQSLDLRMTAAHYRAMSVRGQSYIGLPWQS EEEEECCCEEEEEECCCEEEEEECEECEEECCCCEEEEEHHHEEEEEECCCEEECCCCCC YGFASWFYNAIQSQNTLQSQNTMPSQSTYQPVNRPQYQRLTQKGIGSWYLQKNFSALYLR CCHHHHHHHHHHCCCHHHHCCCCCCCCCCCCCCCHHHHHHHHHCCCEEEEECCCEEEEEE TGRQNNLDNNAGSVHTLINPALDQFVTLGSQSYLAIDKPSTGSIVLYAAQDGDYEIYRDN CCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECCCCCCEEEEEECCCCEEEEECC QLIRRIPAQLGRNEIDYSQLPGGYYNVEIRLVDRLGRIVSQENQTISNIGNQTNNGWFLT HHHHHHHHHHCCCCCCHHHCCCCEEEEEEEEHHHHHHHHCCCCCHHHHCCCCCCCCEEEE MGKGPAKGKKTPRLVQFGRSRVIESVQTNITLLKDDAHHWAVEANVSRPLSLNKVNITPT ECCCCCCCCCCHHHHHHHHHHHHHHHHCCEEEEECCCCEEEEEECCCCCEEEEEEEECCC GGLMSGEKRSGGYVRLNGGNNTLGYFSLARYQSPYVSRYAPDSGSTSGSYTRRIGPTQLS CCCCCCCCCCCCEEEECCCCCCEEEEEEEHHCCCCHHEECCCCCCCCCCEEEECCCCEEE YQFNQYRNNRQHRIQSGWDWQLPQFNLALSLGLQNGGQWNSHNNYGVFLNTTLSFGQSNA EEHHHHCCCCHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCCC SINTAYTQQQLNTSASYQKEFIDNYGASTLGVSGSASGKLNSVGGFAKRSGSRGDISGRV EEEEHHHHHHHCCCHHHHHHHHHCCCCCEECCCCCCCCCCCCCCCHHHCCCCCCCCCEEE GIDNQITNGGISYNGMLALSSQGVALGRSSYSGAALLIKAPALGGTPYSFHVEDSPITGG CCCCCCCCCCCCCCEEEEECCCCEEEECCCCCCEEEEEECCCCCCCCEEEEECCCCCCCC GTYAIPVPRYQDRFFVRTHTDRSDMDMNIQLPVNIVRAHPGQVFSGEADITLNLLYSGFL CEEEEECCCCCCEEEEEEECCCCCCCEEEEECEEEEECCCCCEECCCCCEEEEEEHHHHH KNAQGLPVSGVIEETGDTAYPNGLFSINAQNRLQAITVHGPSGRYRCDMHSQPTHIYLCH CCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEECCCCCEEECCCCCCCEEEEEE AD CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA