| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124345
Identifier: 22124345
GI number: 22124345
Start: 477973
End: 478635
Strand: Reverse
Name: 22124345
Synonym: y0430
Alternate gene names: NA
Gene position: 478635-477973 (Counterclockwise)
Preceding gene: 22124346
Following gene: 22124344
Centisome position: 10.4
GC content: 50.38
Gene sequence:
>663_bases ATGGTGAGGTGGACGGTGAAAAATTTAGTCTTCGCTGCCATTAGCCTCTTGCCGCTCAGTGCCGCTGGCGTGATCGATAT TCAACCACAGGTCGTGGAACTACAGCAGGTAAATACGGTGGTTACCGTGATCAACCATGGCATGACTGCTGAATATATTA CGGTGCAGTTATATCGGTTAAATAACCCTGGTGTCGCCTCTGAATTGGAATCGCTGACCCCTGTTGGCTACCAGCAGCAG CCCTTACTTTTTGCCACACCGCTGAAACTGACGCTAGGCCCTCGACAGAGTGGGAAAATTTTTCTACATGCCTTAGGGGC ACCGGAACAAGAGCAGGTTTATCGGTTAGCCGTGGTACCAAGCAACCACCTGAAAATCAGTGGCAATAATACGGCTGTCG TGGGTGTGCAGATCAGTTATATGGGGCTTATCAGGCACCTGCCAGCATCAATACAACATCAATGGACACACCGTTGTATC GCGGGGAAGCCTGAATTACACAATACCGGCAATACCCGCCTGTACTGGCATCAACTGCAAGCACAGGGGCAAATGATAGA CGATTTTACGCTCTACCCCGGTCGGTATCGGCAGTTAGCTTTCAATGAGTTGCAAGGAAAAGTAGAGGATCAGGCGGTTA ACCTACAGTGCCCTTCGGGCTAG
Upstream 100 bases:
>100_bases AGTAAGTTTAAGCAGCTCGAATCGGGCGGTAACGCCGCACTGGCCGACAGTCTAAACCTGTATCCGGGCACCGCGCTCAC ACTGCCCGTCAAACAACTCA
Downstream 100 bases:
>100_bases CCTCTTGGTAATAAGCTATCAACAAATTTATCTGCATCAAGAAGAAGGATAAACCAGAAACATGAATACCATAAAAATGG CCATCACATTGCTATTGCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 220; Mature: 220
Protein sequence:
>220_residues MVRWTVKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGVASELESLTPVGYQQQ PLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCI AGKPELHNTGNTRLYWHQLQAQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVNLQCPSG
Sequences:
>Translated_220_residues MVRWTVKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGVASELESLTPVGYQQQ PLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCI AGKPELHNTGNTRLYWHQLQAQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVNLQCPSG >Mature_220_residues MVRWTVKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRLNNPGVASELESLTPVGYQQQ PLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVPSNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCI AGKPELHNTGNTRLYWHQLQAQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVNLQCPSG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24425; Mature: 24425
Theoretical pI: Translated: 8.67; Mature: 8.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVRWTVKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRL CEEEEHHHHHHHHHHHHCCCCCCEEECCCCEEHHHHHHEEEEECCCCCCEEEEEEEEEEE NNPGVASELESLTPVGYQQQPLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVP CCCCHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCCCEEEEECCCCCHHHEEEEEEEC SNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPELHNTGNTRLYWHQLQ CCCEEECCCCEEEEEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC AQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVNLQCPSG CCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC >Mature Secondary Structure MVRWTVKNLVFAAISLLPLSAAGVIDIQPQVVELQQVNTVVTVINHGMTAEYITVQLYRL CEEEEHHHHHHHHHHHHCCCCCCEEECCCCEEHHHHHHEEEEECCCCCCEEEEEEEEEEE NNPGVASELESLTPVGYQQQPLLFATPLKLTLGPRQSGKIFLHALGAPEQEQVYRLAVVP CCCCHHHHHHHCCCCCCCCCCEEEECCEEEEECCCCCCCEEEEECCCCCHHHEEEEEEEC SNHLKISGNNTAVVGVQISYMGLIRHLPASIQHQWTHRCIAGKPELHNTGNTRLYWHQLQ CCCEEECCCCEEEEEEEEHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEC AQGQMIDDFTLYPGRYRQLAFNELQGKVEDQAVNLQCPSG CCCCEEEEEEECCCHHHHHHHHHHCCCCCCCEEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA