| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is 22124343
Identifier: 22124343
GI number: 22124343
Start: 476209
End: 477315
Strand: Reverse
Name: 22124343
Synonym: y0428
Alternate gene names: NA
Gene position: 477315-476209 (Counterclockwise)
Preceding gene: 22124344
Following gene: 22124336
Centisome position: 10.37
GC content: 43.72
Gene sequence:
>1107_bases ATGAACATAAAAAACAAACCACTGCTTATCGGGTTATTGCTGTTATTCCTACACCCCACAACTGCCGCAGCCACCAAGTG GGTTGGGAACTATTTTTACCCATTAGCCAATAAGTATTCGAACTGTAACGTCACGTTATTAGAAGATAATAGTGTCGCGG TTTCTTTTGATGTCACATTGGTAGCCGATTTATTTGAAACCGACCGTGGCCCACATCTTCAACGCTGGAAAAAGATAATT GGTACTCAGCAAGATGTTCTGTTGGTACAGAATAATGCTTTACTTTTTCTCTATTTTTATCATGCCGATGGTTCAGCTGA TTTTAGTATCCGGCCTGGGGATATCCAAAATATGTCACTGAATGGCATACCCGTTCAAGAGATTGATTACAACCTCCAAG AGGCAAGGTTTGTCAGCACCCATGCCTTTTCAAACCAAAGTTATCACGTGTCATTCAACATTACGGCAAATGCCCTTAAA CATATTAGAATGGGTGCCACCATTGGGGGGGTACTCCATTCCGAAGGGGTGTCCTATTCCGTGCGCTCACCACAAGGCGT GGCATTTAATCAATCAGGTAATCAATGCGAATTCTTTGACCCCACAACAGAGATAGCACCGTCCCATGCTTTATATATCG AGCCTAAATTCCGATTGGGATCAGCAATATGGCAGCTAAAATCCCTCGATCTGGATCATTTACTCGATAGCACGGCTGAT AACCATGGGTTGCATGCACCATTAGTTAACGGCCCGGCTAACCGTTTTTGTATCCATTATCCGGCGATAGGTACGCAAAA TAGGCGTTATATGATCAGTGCCAGTAATCTCAATGGGTTAGCTGAGAGTAGTCGCTATTTTCAGTTAAAAGATAACCAAG GGGAGCACATCATCAACTACAAGGTCACACTGAAAAATCATGAGGATAGCGAGGCTGATTTTTCATTACCCAAAGAGAAA AAGTTTATTCAGCTAAAGAGTGATACTAGCAGCGGCGGCGAAGCACAGATGTGCTGGTCACCCCGCATTCGGGTTTACAG TACCGATACCACCGATAAAGGTCACTACACGGATACGCTGAATTTTACTATCACGCCGTTAGCCTAA
Upstream 100 bases:
>100_bases TGGTATTCGAAGTTAATAGTTAATAGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAATCGTTAAT CATCACGGAGAGACCATTAA
Downstream 100 bases:
>100_bases TTTCAATGACGTTATTAATCGTTAGATTATCAATAAGCTGAACACTCAATAATTCGAGTTGCAACAGAGCAATCAACGCA TAGGCAACTCGAAATATAAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 368
Protein sequence:
>368_residues MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTLVADLFETDRGPHLQRWKKII GTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSLNGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALK HIRMGATIGGVLHSEGVSYSVRSPQGVAFNQSGNQCEFFDPTTEIAPSHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINYKVTLKNHEDSEADFSLPKEK KFIQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA
Sequences:
>Translated_368_residues MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTLVADLFETDRGPHLQRWKKII GTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSLNGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALK HIRMGATIGGVLHSEGVSYSVRSPQGVAFNQSGNQCEFFDPTTEIAPSHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINYKVTLKNHEDSEADFSLPKEK KFIQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA >Mature_368_residues MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTLVADLFETDRGPHLQRWKKII GTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSLNGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALK HIRMGATIGGVLHSEGVSYSVRSPQGVAFNQSGNQCEFFDPTTEIAPSHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINYKVTLKNHEDSEADFSLPKEK KFIQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTLNFTITPLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41179; Mature: 41179
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTL CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECHHCCCCCCCEEEEEECCCEEEEEEHEE VADLFETDRGPHLQRWKKIIGTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSL EEEHHHCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCEEECCCCCCEEEE NGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALKHIRMGATIGGVLHSEGVSYS CCCCHHHHCCCHHHEEEEEEEEECCCEEEEEEEEEHHHHHHHHCCCEECCEEECCCCEEE VRSPQGVAFNQSGNQCEFFDPTTEIAPSHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD ECCCCCEEECCCCCEEEEECCCHHCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCCCC NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINY CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE KVTLKNHEDSEADFSLPKEKKFIQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTL EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEE NFTITPLA EEEEEECC >Mature Secondary Structure MNIKNKPLLIGLLLLFLHPTTAAATKWVGNYFYPLANKYSNCNVTLLEDNSVAVSFDVTL CCCCCCCHHHHHHHHHHCCCHHHHHHHHCCEECHHCCCCCCCEEEEEECCCEEEEEEHEE VADLFETDRGPHLQRWKKIIGTQQDVLLVQNNALLFLYFYHADGSADFSIRPGDIQNMSL EEEHHHCCCCCHHHHHHHHHCCCCCEEEEECCCEEEEEEEECCCCCCEEECCCCCCEEEE NGIPVQEIDYNLQEARFVSTHAFSNQSYHVSFNITANALKHIRMGATIGGVLHSEGVSYS CCCCHHHHCCCHHHEEEEEEEEECCCEEEEEEEEEHHHHHHHHCCCEECCEEECCCCEEE VRSPQGVAFNQSGNQCEFFDPTTEIAPSHALYIEPKFRLGSAIWQLKSLDLDHLLDSTAD ECCCCCEEECCCCCEEEEECCCHHCCCCEEEEEECCHHHHHHHHHHHCCCHHHHHHCCCC NHGLHAPLVNGPANRFCIHYPAIGTQNRRYMISASNLNGLAESSRYFQLKDNQGEHIINY CCCCCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEEECCCCCEEEEE KVTLKNHEDSEADFSLPKEKKFIQLKSDTSSGGEAQMCWSPRIRVYSTDTTDKGHYTDTL EEEEECCCCCCCCCCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEECCCCCCCCEEEEE NFTITPLA EEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA