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The map label for this gene is dcrB [H]

Identifier: 22124322

GI number: 22124322

Start: 456209

End: 456736

Strand: Reverse

Name: dcrB [H]

Synonym: y0407

Alternate gene names: 22124322

Gene position: 456736-456209 (Counterclockwise)

Preceding gene: 161484897

Following gene: 22124318

Centisome position: 9.93

GC content: 47.73

Gene sequence:

>528_bases
ATGTACAAAAAAATAGTTCGATTTCTTGCCGTCGGCCTGCTGGTCGCAGGATTAAGCGCCTGTGATAACAGTAGCGATAA
TAACGTGGGCCAGACCGTCAGCCTGTTAGATGGCAAAGTGACCTTTAACTTGCCAGCAGACCTGTCAGACCAAAGCGGGA
AGATGGGTAATCAAGCCAATAACATGCACGTTTACGCCAATAATACTGGTGATAAAGCAGTGATCGTCATTTTAGGTGAG
GGCACCAATGAAAAGTTGGAAGTGCTGACCAACCGTTTAGCCGAGCAGCAGCGCGCCCGCGATGCAAACCTGCAAGTGGT
GACCAACAAGACGATTAATATTAACGGGCAACCGTTCCAGCAACTGGACAGCATTATTACCAGTAGCGGCCAAAAAGCGT
ATTCATCTATCGTCATGGGAACCGTCGGTAACCAATTAATGACATTGCAGATTACGCTCCCCGCCGAGAATCAGCAGCAA
GCTCAAACCGAAGCCGAATCCATTATCAGTACCTTGAAGCTGAAATAA

Upstream 100 bases:

>100_bases
TAGAATAACTTAGCAACTATTGATAAATTGTCAGTTGTTGAGGCGTTATCGACATCCGCCCGTGGCTCGAAAGGCATACA
CGTATGAATAAGGGATACCC

Downstream 100 bases:

>100_bases
TCTGTCCCAGCAGAGCGCGGTTCACTCGCGCTCTGTTTTATTGACTTACTCGGCGTTATTAATTTATCCGGCGTTATCAA
CTTATTCAGCGTTATTCACT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 175; Mature: 175

Protein sequence:

>175_residues
MYKKIVRFLAVGLLVAGLSACDNSSDNNVGQTVSLLDGKVTFNLPADLSDQSGKMGNQANNMHVYANNTGDKAVIVILGE
GTNEKLEVLTNRLAEQQRARDANLQVVTNKTININGQPFQQLDSIITSSGQKAYSSIVMGTVGNQLMTLQITLPAENQQQ
AQTEAESIISTLKLK

Sequences:

>Translated_175_residues
MYKKIVRFLAVGLLVAGLSACDNSSDNNVGQTVSLLDGKVTFNLPADLSDQSGKMGNQANNMHVYANNTGDKAVIVILGE
GTNEKLEVLTNRLAEQQRARDANLQVVTNKTININGQPFQQLDSIITSSGQKAYSSIVMGTVGNQLMTLQITLPAENQQQ
AQTEAESIISTLKLK
>Mature_175_residues
MYKKIVRFLAVGLLVAGLSACDNSSDNNVGQTVSLLDGKVTFNLPADLSDQSGKMGNQANNMHVYANNTGDKAVIVILGE
GTNEKLEVLTNRLAEQQRARDANLQVVTNKTININGQPFQQLDSIITSSGQKAYSSIVMGTVGNQLMTLQITLPAENQQQ
AQTEAESIISTLKLK

Specific function: Required for phage C1 adsorption [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Periplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87082269, Length=181, Percent_Identity=56.353591160221, Blast_Score=214, Evalue=3e-57,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014894 [H]

Pfam domain/function: PF08786 DUF1795 [H]

EC number: NA

Molecular weight: Translated: 18824; Mature: 18824

Theoretical pI: Translated: 5.88; Mature: 5.88

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKKIVRFLAVGLLVAGLSACDNSSDNNVGQTVSLLDGKVTFNLPADLSDQSGKMGNQAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCC
NMHVYANNTGDKAVIVILGEGTNEKLEVLTNRLAEQQRARDANLQVVTNKTININGQPFQ
CEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCHH
QLDSIITSSGQKAYSSIVMGTVGNQLMTLQITLPAENQQQAQTEAESIISTLKLK
HHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYKKIVRFLAVGLLVAGLSACDNSSDNNVGQTVSLLDGKVTFNLPADLSDQSGKMGNQAN
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEECCEEEEECCCCCCCCCCCCCCCCC
NMHVYANNTGDKAVIVILGEGTNEKLEVLTNRLAEQQRARDANLQVVTNKTININGQPFQ
CEEEEEECCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCCEEEEECCEEEECCCCHH
QLDSIITSSGQKAYSSIVMGTVGNQLMTLQITLPAENQQQAQTEAESIISTLKLK
HHHHHHHCCCHHHHHHHHHHCCCCEEEEEEEEECCCCHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8041620; 9278503; 8752353 [H]