| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yigL [H]
Identifier: 22124316
GI number: 22124316
Start: 447608
End: 448546
Strand: Direct
Name: yigL [H]
Synonym: y0401
Alternate gene names: 22124316
Gene position: 447608-448546 (Clockwise)
Preceding gene: 22124315
Following gene: 22124317
Centisome position: 9.73
GC content: 48.14
Gene sequence:
>939_bases ATGAGATCCTGTTTGAGCGGGACACGCTGCGTGCCGAGGCGCTTAGCGCCATATTGCGCTTTTTCGCGCAACATCAATCA TCAGTCGGCCATTAGGCGCCGACGCCACCAGAGGTTAGAACATACCATTATGTATCATGTTGTTGCTTCCGATTTAGATG GCACGCTGCTATCGCCTAATCATACGTTGACCCCTTATACGAAAGAAACACTCAAATTGCTGACGCAGCGTGATGTGCAT TTTGTGTTTGCCACCGGGCGCCACCATATCGATGTGGCACAAATCCGCGATAATTTGGAGATCAGTGCTTTTATGATCAC CTCTAACGGTGCACGCGTGCATAACACTGAGGGAGAATTGATTTTCAGTCATAACCTTGATGCGGATATTGCCCGTGATT TGTACAATCTTGAACATCATAATCCGGATATCCTGACTAACGTCTATCTGGGCGACGAATGGTTTATGAACCGCGAATGT CCAGAGCAAGAAGAGTTCTTCCGTGAATCCGTGTTCAATTATCAGGTATTTGAACCTGCATTACTGCCGACTGACGGCGT ATGTAAGGTGTATTTCACCTGCGAAGATCATGACAAGTTGCTGATCTTGGAAGAGGCCATTAATGCCCGCTGGGGCGATC GCGTTAACGTCAGCTTCTCCTTCCCTACCTGCCTGGAAGTGATGGGCGGCGGCGTGTCCAAAGGCCATGCGCTGGAACAG GTTGCTAAAATCATCGGTTATTCACTAAAAGACTGTATTGCCTTTGGCGATGGCATGAATGATGTCGAAATGTTGTCGAT GTCTGGCAAAGGCTGCATCATGCGCGACGCACATCAGCGGCTAAAAGATGTGTTGCCGAATTTGGAAGTGATAGGCTCTA ATGCTGATGATGCGGTACCACACTACTTGCGTAAGATGTTCTTAGGTAAGGAAGAGTAA
Upstream 100 bases:
>100_bases GTGGTTCATAACCCAGCCCACGATGCTTTTTCTCAGGCAATGACATTGGCAGGGCACCCCTGTGAAGGGGGGCGTCCTCA GGTCATTCAAGGCGCACGCC
Downstream 100 bases:
>100_bases GGTTAACGTTGCAGTAGTATGATGATGCTGTGGAGTAGGGTGGCCTTTGGTCACCCTTCCTCCTTGGCGTTGCAGGGGGG GTTAGCGGTGCGCACTCATC
Product: putative sugar phosphatase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 312; Mature: 312
Protein sequence:
>312_residues MRSCLSGTRCVPRRLAPYCAFSRNINHQSAIRRRRHQRLEHTIMYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVH FVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTEGELIFSHNLDADIARDLYNLEHHNPDILTNVYLGDEWFMNREC PEQEEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQ VAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKDVLPNLEVIGSNADDAVPHYLRKMFLGKEE
Sequences:
>Translated_312_residues MRSCLSGTRCVPRRLAPYCAFSRNINHQSAIRRRRHQRLEHTIMYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVH FVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTEGELIFSHNLDADIARDLYNLEHHNPDILTNVYLGDEWFMNREC PEQEEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQ VAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKDVLPNLEVIGSNADDAVPHYLRKMFLGKEE >Mature_312_residues MRSCLSGTRCVPRRLAPYCAFSRNINHQSAIRRRRHQRLEHTIMYHVVASDLDGTLLSPNHTLTPYTKETLKLLTQRDVH FVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTEGELIFSHNLDADIARDLYNLEHHNPDILTNVYLGDEWFMNREC PEQEEFFRESVFNYQVFEPALLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQ VAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKDVLPNLEVIGSNADDAVPHYLRKMFLGKEE
Specific function: Unknown
COG id: COG0561
COG function: function code R; Predicted hydrolases of the HAD superfamily
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]
Homologues:
Organism=Escherichia coli, GI48994981, Length=265, Percent_Identity=74.3396226415094, Blast_Score=422, Evalue=1e-119, Organism=Escherichia coli, GI87081741, Length=260, Percent_Identity=41.1538461538462, Blast_Score=190, Evalue=1e-49, Organism=Escherichia coli, GI1786982, Length=278, Percent_Identity=27.3381294964029, Blast_Score=83, Evalue=3e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR013200 - InterPro: IPR006379 - InterPro: IPR000150 [H]
Pfam domain/function: PF08282 Hydrolase_3 [H]
EC number: NA
Molecular weight: Translated: 35583; Mature: 35583
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: PS01228 COF_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 6.1 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 6.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRSCLSGTRCVPRRLAPYCAFSRNINHQSAIRRRRHQRLEHTIMYHVVASDLDGTLLSPN CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC HTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTEGEL CCCCCCHHHHHHHHHHCCEEEEEECCCCEEEHHHHHCCCEEEEEEEECCCCEEECCCCCE IFSHNLDADIARDLYNLEHHNPDILTNVYLGDEWFMNRECPEQEEFFRESVFNYQVFEPA EEECCCCHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHCCCEEECCC LLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQ CCCCCCCEEEEEEECCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHH VAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKDVLPNLEVIGSNADDAVP HHHHHCCCHHHHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHH HYLRKMFLGKEE HHHHHHHCCCCC >Mature Secondary Structure MRSCLSGTRCVPRRLAPYCAFSRNINHQSAIRRRRHQRLEHTIMYHVVASDLDGTLLSPN CCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCC HTLTPYTKETLKLLTQRDVHFVFATGRHHIDVAQIRDNLEISAFMITSNGARVHNTEGEL CCCCCCHHHHHHHHHHCCEEEEEECCCCEEEHHHHHCCCEEEEEEEECCCCEEECCCCCE IFSHNLDADIARDLYNLEHHNPDILTNVYLGDEWFMNRECPEQEEFFRESVFNYQVFEPA EEECCCCHHHHHHHHHHCCCCCCEEEEEEECCHHCCCCCCCCHHHHHHHHHCCCEEECCC LLPTDGVCKVYFTCEDHDKLLILEEAINARWGDRVNVSFSFPTCLEVMGGGVSKGHALEQ CCCCCCCEEEEEEECCCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHCCCCCCCHHHHH VAKIIGYSLKDCIAFGDGMNDVEMLSMSGKGCIMRDAHQRLKDVLPNLEVIGSNADDAVP HHHHHCCCHHHHHHHCCCCCCHHEEEECCCCCCHHHHHHHHHHHCCCCEEECCCCCHHHH HYLRKMFLGKEE HHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]