| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is menA [H]
Identifier: 22124211
GI number: 22124211
Start: 311719
End: 312648
Strand: Reverse
Name: menA [H]
Synonym: y0293
Alternate gene names: 22124211
Gene position: 312648-311719 (Counterclockwise)
Preceding gene: 22124212
Following gene: 22124210
Centisome position: 6.8
GC content: 48.82
Gene sequence:
>930_bases ATGAAGCGAAAAATGAGCCTATCAATCAACACCAGCCAAACCCAGGCTTGGCTGGAAAGCCTACGACCACGCACCCTACC ATTGGCGTTCGCCTCTATCGTTACCGGTTCAGCTCTGGCTGTCTGGCTCGATAGTTTTAAACCCGCCGTGGCACTATTAG CCCTATTAACTGCCGGTCTACTGCAAATTCTATCCAATCTGGCTAACGACTATGGCGATGCGGTGAAAGGCAGCGATACC GAAGAACGTATCGGGCCATTACGCGGTATGCAAAAAGGGATAATTAGCCACCAGCAAATGAAAGTGGCGCTAATTATCAC CGTGATCTTAACAATCATTTCAGGTATCGCCCTCATTGCCGTCGCCTGTGAAAAGCCCAGCGATATTCTTGGATTTTTAC TGCTTGGCCTGATGGCGATTGTTGCCGCCATTACTTACACCGTGGGGAGAAAACCCTATGGTTATATGGGATTGGGTGAT ATTTCGGTATTGGTATTCTTCGGTTGGTTAAGCGTCGCAGGGACCTATTATCTTCAAGCTGGCCACTTTGATAGCATCGT CATGCTGCCGGCCACGGCCTGTGGTTTACTGGCCACGGCGGTATTAAATATTAATAACTTACGCGATATCGAAAATGATA AAGCAAATGGCAAAAATACGCTGGCAGTCCGTCTAGGGCCTGTCGTAGCACGCTATTATCATGCGCTGTTAATTGGTGCC GCCATCTTCTGCCTGGCACTCTTCAGCATTCTCCATCTGCACAGTTGGCACGGTTGGATCTTTTTATTAGCGATCCCATT ACTGGGAAAACATGCGCTGTTTGTTTTACGGGACCCTACCGCAGCAGGTATGCGCCCTATGCTCGAGCAGATGGTGAAAG CCGCTTTACTGACCAATATCCTGTTTGCTGTGGGCCTGGTATTCAGTTAA
Upstream 100 bases:
>100_bases TCATAATTTTTTGACATGATAATTTTATTAACATTATTTCCATTTGGCATGATCCCGTTTTCTTACACGCCGAGATTAAG GCGGACCAGACTCCTATTGA
Downstream 100 bases:
>100_bases TACGGCTTGTTTATCATAGAAAGGTCTCCGGGCCATTAGCGGCTCAAGGTAACTTGAATAAATTTAACAATTGATGATTT TGCCAACAGCGGCCAGAAAA
Product: 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Products: NA
Alternate protein names: DHNA-octaprenyltransferase [H]
Number of amino acids: Translated: 309; Mature: 309
Protein sequence:
>309_residues MKRKMSLSINTSQTQAWLESLRPRTLPLAFASIVTGSALAVWLDSFKPAVALLALLTAGLLQILSNLANDYGDAVKGSDT EERIGPLRGMQKGIISHQQMKVALIITVILTIISGIALIAVACEKPSDILGFLLLGLMAIVAAITYTVGRKPYGYMGLGD ISVLVFFGWLSVAGTYYLQAGHFDSIVMLPATACGLLATAVLNINNLRDIENDKANGKNTLAVRLGPVVARYYHALLIGA AIFCLALFSILHLHSWHGWIFLLAIPLLGKHALFVLRDPTAAGMRPMLEQMVKAALLTNILFAVGLVFS
Sequences:
>Translated_309_residues MKRKMSLSINTSQTQAWLESLRPRTLPLAFASIVTGSALAVWLDSFKPAVALLALLTAGLLQILSNLANDYGDAVKGSDT EERIGPLRGMQKGIISHQQMKVALIITVILTIISGIALIAVACEKPSDILGFLLLGLMAIVAAITYTVGRKPYGYMGLGD ISVLVFFGWLSVAGTYYLQAGHFDSIVMLPATACGLLATAVLNINNLRDIENDKANGKNTLAVRLGPVVARYYHALLIGA AIFCLALFSILHLHSWHGWIFLLAIPLLGKHALFVLRDPTAAGMRPMLEQMVKAALLTNILFAVGLVFS >Mature_309_residues MKRKMSLSINTSQTQAWLESLRPRTLPLAFASIVTGSALAVWLDSFKPAVALLALLTAGLLQILSNLANDYGDAVKGSDT EERIGPLRGMQKGIISHQQMKVALIITVILTIISGIALIAVACEKPSDILGFLLLGLMAIVAAITYTVGRKPYGYMGLGD ISVLVFFGWLSVAGTYYLQAGHFDSIVMLPATACGLLATAVLNINNLRDIENDKANGKNTLAVRLGPVVARYYHALLIGA AIFCLALFSILHLHSWHGWIFLLAIPLLGKHALFVLRDPTAAGMRPMLEQMVKAALLTNILFAVGLVFS
Specific function: Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to dimethylmenaquinone (DMK). Attaches octaprenylpyrophosphate, a membrane-bound 40-carbon side chain to DHNA. The conversion of DHNA to DMK proceeds in three stages:the removal of the carboxyl group of DHNA
COG id: COG1575
COG function: function code H; 1,4-dihydroxy-2-naphthoate octaprenyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the menA family [H]
Homologues:
Organism=Homo sapiens, GI7019551, Length=307, Percent_Identity=27.0358306188925, Blast_Score=68, Evalue=1e-11, Organism=Escherichia coli, GI1790365, Length=298, Percent_Identity=68.1208053691275, Blast_Score=409, Evalue=1e-115, Organism=Drosophila melanogaster, GI17737429, Length=293, Percent_Identity=28.3276450511945, Blast_Score=84, Evalue=9e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004657 - InterPro: IPR000537 [H]
Pfam domain/function: PF01040 UbiA [H]
EC number: =2.5.1.74 [H]
Molecular weight: Translated: 33239; Mature: 33239
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRKMSLSINTSQTQAWLESLRPRTLPLAFASIVTGSALAVWLDSFKPAVALLALLTAGL CCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LQILSNLANDYGDAVKGSDTEERIGPLRGMQKGIISHQQMKVALIITVILTIISGIALIA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VACEKPSDILGFLLLGLMAIVAAITYTVGRKPYGYMGLGDISVLVFFGWLSVAGTYYLQA HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEC GHFDSIVMLPATACGLLATAVLNINNLRDIENDKANGKNTLAVRLGPVVARYYHALLIGA CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH AIFCLALFSILHLHSWHGWIFLLAIPLLGKHALFVLRDPTAAGMRPMLEQMVKAALLTNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH LFAVGLVFS HHHHHHHCC >Mature Secondary Structure MKRKMSLSINTSQTQAWLESLRPRTLPLAFASIVTGSALAVWLDSFKPAVALLALLTAGL CCCEEEEEECCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH LQILSNLANDYGDAVKGSDTEERIGPLRGMQKGIISHQQMKVALIITVILTIISGIALIA HHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VACEKPSDILGFLLLGLMAIVAAITYTVGRKPYGYMGLGDISVLVFFGWLSVAGTYYLQA HHCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHEEC GHFDSIVMLPATACGLLATAVLNINNLRDIENDKANGKNTLAVRLGPVVARYYHALLIGA CCCCCEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHH AIFCLALFSILHLHSWHGWIFLLAIPLLGKHALFVLRDPTAAGMRPMLEQMVKAALLTNI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHH LFAVGLVFS HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9573170; 8346018; 9278503 [H]