| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is mchE [H]
Identifier: 22124205
GI number: 22124205
Start: 308017
End: 309333
Strand: Reverse
Name: mchE [H]
Synonym: y0287
Alternate gene names: 22124205
Gene position: 309333-308017 (Counterclockwise)
Preceding gene: 22124210
Following gene: 22124204
Centisome position: 6.72
GC content: 39.33
Gene sequence:
>1317_bases ATGATGGGTATAACGGAGCGAGGAATGAGCAGCAATCAGATATTCCGCCGGGACGCGGTAGAGTATATTAGAACAAAATG GTTGGGGAAGGCGCTGTTAACTTCGGGTTATTCCACAACGTTCATAGCTGCTTTATGTGCTATCTTTTTGGTGTTATTAA TTACTCTTATCATTTATGGAACATACACCCGTAGAATAAACGTTAATGGTGAGGTTATTTCTCAGCCTCACCCCATAAAC ATTTTTTCTCCCCAACAAGGATTCATTACCAAAAAATGGGTGGAAGTGGGTGATATTGTCCGTAAAGGTCAGCACTTATA TCAAATTGATGTCAGTCGAACGACCTTTTCAGGTAATGTTAGCCTTAACTCTTTAGAAGCAATAAATAACCAACTTTCTC AAATTGATAGCATCATCAATAATACACAGAAAAATAAAGAACTTACGCTACTTAATTTACGTCAGCAGCTCGCACAATAC CAAAAGGCACATAAGAAATCCCAAGAGCTGGTCGATAACGCAGGCAAAGGAATGGATGATATGCGGCGTACAATGGCCAG TTATGGTACTTACCAACGTCAGGGTCTAATTACTAAAGATCAATTAACCAATCAGCGTTCCCTCTTTTATCAACAACAGA ATGCCTTTCAAAGCCTGAATACTCAACTGATACAAGAAAGCTTACAGATAGCAAAACTTGAAAGTGAAATCTCTACGCGA GCATCAGATTTTGATAATGATATCTCTCAGTATTTATTTCAAAAAGGTGATTTAAAGCGTCAATTGGCTGAAGTTGATGC GAGTGGCATGTTACTCATTAATTCGCCAAGCGATGGCAAGATTGAAAATATGAGTGTGACCCAAGGACAGATGGTCAACG TAAATGACAGTTTGGTCCAATTGACGCCTTCTGATAATCCCTATTATTGTCTTGTGCTTTGGGTACCAAACAATAGCGTC CCTTATATAAATACTGGAGACAAAGTCAATATACGCTATGACGCTTTCCCCTTTGAAAAGTTTGGTCAATTTCCTGGGCG TATAATCTCTATCTCTAATGTCCCCGTTTCACAACAAGAAATAGCCTCATACAATATTGCACCGCGGCTCCCGAACGGTG GACTCATTGAGCCTTACTATAAAGTCATCGTGGCACTAGACGATATTCATTTTCGTTATCAGTCTAAACCTTTAATGCTA TCCAATGGCCTTAAAGCTAATGTCACGTTATTCCTTGAAAAAAGGCCTCTTTATCAATGGATGCTATCTCCATTTTATGA CATCAAGAAAAGTGTAACGGGGCCTGTAAATGAATGA
Upstream 100 bases:
>100_bases AAATCAAACTGCAATTCGTAAATAATTAAATATACCGAAATAGAGTTACGTGAAAATGATTCAATTAAACCTTCTATTTT TTGTGATATGTTGATTTGAA
Downstream 100 bases:
>100_bases TACGCATTTTAACGAGATAAAAAACCGTCTGAATTTTAGCTTTCGTCGTAAAGTCCCACAGGTGCTTCAAACCGAAGCAG CAGAATGCGGACTTGCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 438; Mature: 438
Protein sequence:
>438_residues MMGITERGMSSNQIFRRDAVEYIRTKWLGKALLTSGYSTTFIAALCAIFLVLLITLIIYGTYTRRINVNGEVISQPHPIN IFSPQQGFITKKWVEVGDIVRKGQHLYQIDVSRTTFSGNVSLNSLEAINNQLSQIDSIINNTQKNKELTLLNLRQQLAQY QKAHKKSQELVDNAGKGMDDMRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR ASDFDNDISQYLFQKGDLKRQLAEVDASGMLLINSPSDGKIENMSVTQGQMVNVNDSLVQLTPSDNPYYCLVLWVPNNSV PYINTGDKVNIRYDAFPFEKFGQFPGRIISISNVPVSQQEIASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLML SNGLKANVTLFLEKRPLYQWMLSPFYDIKKSVTGPVNE
Sequences:
>Translated_438_residues MMGITERGMSSNQIFRRDAVEYIRTKWLGKALLTSGYSTTFIAALCAIFLVLLITLIIYGTYTRRINVNGEVISQPHPIN IFSPQQGFITKKWVEVGDIVRKGQHLYQIDVSRTTFSGNVSLNSLEAINNQLSQIDSIINNTQKNKELTLLNLRQQLAQY QKAHKKSQELVDNAGKGMDDMRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR ASDFDNDISQYLFQKGDLKRQLAEVDASGMLLINSPSDGKIENMSVTQGQMVNVNDSLVQLTPSDNPYYCLVLWVPNNSV PYINTGDKVNIRYDAFPFEKFGQFPGRIISISNVPVSQQEIASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLML SNGLKANVTLFLEKRPLYQWMLSPFYDIKKSVTGPVNE >Mature_438_residues MMGITERGMSSNQIFRRDAVEYIRTKWLGKALLTSGYSTTFIAALCAIFLVLLITLIIYGTYTRRINVNGEVISQPHPIN IFSPQQGFITKKWVEVGDIVRKGQHLYQIDVSRTTFSGNVSLNSLEAINNQLSQIDSIINNTQKNKELTLLNLRQQLAQY QKAHKKSQELVDNAGKGMDDMRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR ASDFDNDISQYLFQKGDLKRQLAEVDASGMLLINSPSDGKIENMSVTQGQMVNVNDSLVQLTPSDNPYYCLVLWVPNNSV PYINTGDKVNIRYDAFPFEKFGQFPGRIISISNVPVSQQEIASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLML SNGLKANVTLFLEKRPLYQWMLSPFYDIKKSVTGPVNE
Specific function: Probably involved, in conjunction with mchF, in the secretion of microcin H47 [H]
COG id: COG0845
COG function: function code M; Membrane-fusion protein
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003997 - InterPro: IPR006143 - InterPro: IPR006144 - InterPro: IPR011053 [H]
Pfam domain/function: PF00529 HlyD [H]
EC number: NA
Molecular weight: Translated: 49704; Mature: 49704
Theoretical pI: Translated: 9.30; Mature: 9.30
Prosite motif: PS00543 HLYD_FAMILY
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMGITERGMSSNQIFRRDAVEYIRTKWLGKALLTSGYSTTFIAALCAIFLVLLITLIIYG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC TYTRRINVNGEVISQPHPINIFSPQQGFITKKWVEVGDIVRKGQHLYQIDVSRTTFSGNV CEEEEEECCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECEEEEECCC SLNSLEAINNQLSQIDSIINNTQKNKELTLLNLRQQLAQYQKAHKKSQELVDNAGKGMDD CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR HHHHHHHCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASDFDNDISQYLFQKGDLKRQLAEVDASGMLLINSPSDGKIENMSVTQGQMVNVNDSLVQ HHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCEECEEECCCEEEECCCCEEE LTPSDNPYYCLVLWVPNNSVPYINTGDKVNIRYDAFPFEKFGQFPGRIISISNVPVSQQE ECCCCCCEEEEEEEECCCCCCEEECCCEEEEEEECCCHHHHCCCCCEEEEECCCCCCHHH IASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLMLSNGLKANVTLFLEKRPLYQW HHHCCCCCCCCCCCCCCHHHHHHEEEEHHEEEECCCCEEEECCCCEEEEEEEECCHHHHH MLSPFYDIKKSVTGPVNE HHHHHHHHHHHCCCCCCC >Mature Secondary Structure MMGITERGMSSNQIFRRDAVEYIRTKWLGKALLTSGYSTTFIAALCAIFLVLLITLIIYG CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHC TYTRRINVNGEVISQPHPINIFSPQQGFITKKWVEVGDIVRKGQHLYQIDVSRTTFSGNV CEEEEEECCCEEECCCCCCEEECCCCCCHHHHHHHHHHHHHCCCEEEEEEECEEEEECCC SLNSLEAINNQLSQIDSIINNTQKNKELTLLNLRQQLAQYQKAHKKSQELVDNAGKGMDD CHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH MRRTMASYGTYQRQGLITKDQLTNQRSLFYQQQNAFQSLNTQLIQESLQIAKLESEISTR HHHHHHHCCCHHHCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH ASDFDNDISQYLFQKGDLKRQLAEVDASGMLLINSPSDGKIENMSVTQGQMVNVNDSLVQ HHHHHHHHHHHHHHCCHHHHHHHHCCCCCEEEEECCCCCCEECEEECCCEEEECCCCEEE LTPSDNPYYCLVLWVPNNSVPYINTGDKVNIRYDAFPFEKFGQFPGRIISISNVPVSQQE ECCCCCCEEEEEEEECCCCCCEEECCCEEEEEEECCCHHHHCCCCCEEEEECCCCCCHHH IASYNIAPRLPNGGLIEPYYKVIVALDDIHFRYQSKPLMLSNGLKANVTLFLEKRPLYQW HHHCCCCCCCCCCCCCCHHHHHHEEEEHHEEEECCCCEEEECCCCEEEEEEEECCHHHHH MLSPFYDIKKSVTGPVNE HHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11181394 [H]