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The map label for this gene is rstR1 [H]

Identifier: 22124180

GI number: 22124180

Start: 277204

End: 277692

Strand: Direct

Name: rstR1 [H]

Synonym: y0260

Alternate gene names: 22124180

Gene position: 277204-277692 (Clockwise)

Preceding gene: 22124173

Following gene: 22124181

Centisome position: 6.03

GC content: 43.35

Gene sequence:

>489_bases
TTGCATCGTATTACGATATCTAATAGCATCGCTATACGATGTGTATTCGTTTTTAAAAGTGGCCTTATACTGGAGCATCT
TATGACTGACGTGATAGACGAGATTATGCAGACGGAAGAACAGCGCCGGGCATTTGGCCTACGGCTAAAAGAATTACGTA
AACAACAACATAAAACACAAAAGGAAGTCGCGACCCGTATTGGCTTGCAACTTTCACAGTACAATAAATATGAATCAGGG
ATGCATATTCCACCGGCGGATAAATTAATTACGCTGGCTGAGTTACTGGTTACCAGCATTGATTATCTGCTACTTGGCTC
GTCTAACGAGACCTCATCGATTAGGAATACGCGCTTATTAGAGCGTTTTAAAGCCTTGTCGCAGTGCCAACCGGAAGAGC
AGGAAACCGTGATTAAGTTAATTGATGCGGTGATTGTGAAGCATCGGGTTGAATCGGCTTTACAGCCAGTTGACCCAGAG
AAGAAGTGA

Upstream 100 bases:

>100_bases
GGTTCAGCTCGGTCTGCATCTGGTAAACTGCTGTTTTTAGATAGGAGATAGTCAGACTGCCCCGAGAACGTTCCTTTTTT
AAAATACGTTAACATTTAAT

Downstream 100 bases:

>100_bases
TAACCACAGTATTTTAACACAGGGTTGAGGTGTATCAGCACCTCAGCCCCGCTAACCACAAGCAACTAAGCAGGAGTTAC
TATGGCTAAGGCACATTCTA

Product: transcriptional repressor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MHRITISNSIAIRCVFVFKSGLILEHLMTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESG
MHIPPADKLITLAELLVTSIDYLLLGSSNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPE
KK

Sequences:

>Translated_162_residues
MHRITISNSIAIRCVFVFKSGLILEHLMTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESG
MHIPPADKLITLAELLVTSIDYLLLGSSNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPE
KK
>Mature_162_residues
MHRITISNSIAIRCVFVFKSGLILEHLMTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQKEVATRIGLQLSQYNKYESG
MHIPPADKLITLAELLVTSIDYLLLGSSNETSSIRNTRLLERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPE
KK

Specific function: Transcriptional repressor of the integrated CTXPhi phage gene rstA2 [H]

COG id: COG1396

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 18610; Mature: 18610

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRITISNSIAIRCVFVFKSGLILEHLMTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQ
CCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVATRIGLQLSQYNKYESGMHIPPADKLITLAELLVTSIDYLLLGSSNETSSIRNTRLL
HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPEKK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure
MHRITISNSIAIRCVFVFKSGLILEHLMTDVIDEIMQTEEQRRAFGLRLKELRKQQHKTQ
CCEEEECCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
KEVATRIGLQLSQYNKYESGMHIPPADKLITLAELLVTSIDYLLLGSSNETSSIRNTRLL
HHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
ERFKALSQCQPEEQETVIKLIDAVIVKHRVESALQPVDPEKK
HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9220000; 10952301 [H]