| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is yicG [H]
Identifier: 22124019
GI number: 22124019
Start: 105254
End: 105877
Strand: Direct
Name: yicG [H]
Synonym: y0099
Alternate gene names: 22124019
Gene position: 105254-105877 (Clockwise)
Preceding gene: 22124018
Following gene: 22124021
Centisome position: 2.29
GC content: 47.28
Gene sequence:
>624_bases ATGCTACTCAGTGTTCTTTATATTATTGGTATCACCGCTGAAGCCATGACCGGGGCTCTGGCTGCGGGTCGCCGCCAAAT GGATATGTTTGGCGTTATTATTATTGCCTCAGCGACCGCAATTGGCGGTGGCTCGGTTAGAGATATGCTTTTAGGCCACT ATCCACTTGGTTGGGTTAAGCATCCTGAATACATTGTGATCGTCGCCATCGCAGCGATCGTCACCACCTGGATGGCTCCA TTGATGAAACAGTTACGCCATCTATTTTTAGTGCTTGATGCCATTGGGCTGATTGTTTTCTCAATTATTGGCGCACAAAT TGCTCTCGATATGGGCCACAGTACTATTATTGCCGCTATTGCCGCCGTGATTACTGGTGTCTTTGGTGGCGTACTACGCG ATATGCTCTGCAACTGCATTCCCTTAGTGTTTCAGAAAGAAATTTATGCAGGCATCTCATTTGCGGCAGCCTGGATTTAC ATTGCTCTGCAATACACGCCGCTGTCCCATAATTGGGTCATTATCATTACGCTCATCACCGGCTTAGCGCTAGATTACTC GCCTTACGATTCCGGCTTGGCCTGCCTGTATTCAAATATGAGCACTCAGACCATTAAGTTATAG
Upstream 100 bases:
>100_bases TTAACTAACACTGATAGTATCACTTAGAAAATCTCAGTCGCGTTGATATGGCTTTGTGATTACTCTGCGGCCTTTCATTG TCTCCAACATTTGATTCATT
Downstream 100 bases:
>100_bases CCCTAGGAGGATTTACTCTGTGAGCTCGAACCCAACAACTTTCTGAGTAGATAAGAAATCAGCCAGTGCTTGTACGTCGG GGTGATCCAAAAAATGCTTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MLLSVLYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHYPLGWVKHPEYIVIVAIAAIVTTWMAP LMKQLRHLFLVLDAIGLIVFSIIGAQIALDMGHSTIIAAIAAVITGVFGGVLRDMLCNCIPLVFQKEIYAGISFAAAWIY IALQYTPLSHNWVIIITLITGLALDYSPYDSGLACLYSNMSTQTIKL
Sequences:
>Translated_207_residues MLLSVLYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHYPLGWVKHPEYIVIVAIAAIVTTWMAP LMKQLRHLFLVLDAIGLIVFSIIGAQIALDMGHSTIIAAIAAVITGVFGGVLRDMLCNCIPLVFQKEIYAGISFAAAWIY IALQYTPLSHNWVIIITLITGLALDYSPYDSGLACLYSNMSTQTIKL >Mature_207_residues MLLSVLYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHYPLGWVKHPEYIVIVAIAAIVTTWMAP LMKQLRHLFLVLDAIGLIVFSIIGAQIALDMGHSTIIAAIAAVITGVFGGVLRDMLCNCIPLVFQKEIYAGISFAAAWIY IALQYTPLSHNWVIIITLITGLALDYSPYDSGLACLYSNMSTQTIKL
Specific function: Unknown
COG id: COG2860
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0126 family [H]
Homologues:
Organism=Escherichia coli, GI87082304, Length=182, Percent_Identity=74.1758241758242, Blast_Score=274, Evalue=3e-75, Organism=Escherichia coli, GI1786352, Length=154, Percent_Identity=42.2077922077922, Blast_Score=94, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005115 [H]
Pfam domain/function: PF03458 UPF0126 [H]
EC number: NA
Molecular weight: Translated: 22260; Mature: 22260
Theoretical pI: Translated: 7.04; Mature: 7.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 6.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 6.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLSVLYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHYPLGWVK CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEHHHCCCCHHHHHHHCCCCCCCCC HPEYIVIVAIAAIVTTWMAPLMKQLRHLFLVLDAIGLIVFSIIGAQIALDMGHSTIIAAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AAVITGVFGGVLRDMLCNCIPLVFQKEIYAGISFAAAWIYIALQYTPLSHNWVIIITLIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEHHHHHH GLALDYSPYDSGLACLYSNMSTQTIKL HHHCCCCCCCCCHHHHHCCCCCEEECC >Mature Secondary Structure MLLSVLYIIGITAEAMTGALAAGRRQMDMFGVIIIASATAIGGGSVRDMLLGHYPLGWVK CHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHEEEEHHHCCCCHHHHHHHCCCCCCCCC HPEYIVIVAIAAIVTTWMAPLMKQLRHLFLVLDAIGLIVFSIIGAQIALDMGHSTIIAAI CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH AAVITGVFGGVLRDMLCNCIPLVFQKEIYAGISFAAAWIYIALQYTPLSHNWVIIITLIT HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCCCEEHHHHHH GLALDYSPYDSGLACLYSNMSTQTIKL HHHCCCCCCCCCHHHHHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 12471157 [H]