| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
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The map label for this gene is modA
Identifier: 22123978
GI number: 22123978
Start: 69830
End: 70648
Strand: Direct
Name: modA
Synonym: y0057
Alternate gene names: NA
Gene position: 69830-70648 (Clockwise)
Preceding gene: 22123977
Following gene: 22123982
Centisome position: 1.52
GC content: 48.23
Gene sequence:
>819_bases GTGGCCTGTCTTTTGGCGCAATATAATAGCGGAGATATATTAATGAAATATTCTAACGTGATTGTATCGGGCCTGTGTAT GAGTATGGTCAGCCTGGCAACGGCAGCACCAACAGAGGTTCCATCCGACGAGCCAGTGACCCTACGGATCATTTCGTCGA TGGCCACTCGACAGTTCTTGACCGAGGTTATCGCGCAATTTGCGCAACAATCAAAATACCAGGTCGAGCTCGAGTCAGTG GGAGGAGTGGATGCCACTAAACGCGTAGAAGCTGGCGAAGCTTTTGACGTGGTGATCCTGTCTGCCAATGCAATCGATAA ACTGATTGATTCAGGTAAGATTTTACCTAATAGTCGCATTGACCTGGTTAAGTCAGGCGTGGCTATCGCGGTGAAAGAAG GGGCACAGATAATGGATGTTAGCAGCGAGGAAACGGTAAAACAGGCTGTTTTAGCGGCCAATACGATCGCTTACTCAACA GGCCCTAGCGGCGTGTACCTGACTGAGGTTTTCGAGCACTGGGGCATTGCCGAACAAATCAAAGATCGCATTGTAAAAGT CCCACCAGGAGTCCCTGTCGGTTCTCTGGTAGCCAAGGGTGAAGTTGAACTTGGATTCCTGCAACTCAGTGAACTGCTTC ATTTAAAAGGCATTATCATACTTGGGCCTTTGCCCACGGATATTCAGATAATGACTCATTTTTCAGCAGGGGTCCCCCTT AAAACCAATCAGCAAAAAGCCATTAAGGTATTACTGGACTTCCTTGCATCGCCTGCGGCTACAGAGGCTAAAATCAAGAA TGGCATGGAGCCGATCTGA
Upstream 100 bases:
>100_bases GCAATTCCTGGGTTTTGTTAAGTAATATTGCTGACCAATCTATTTATTCAGCTAATTTAAACGTCGCTTAGCCACTGAAG ACAAGGTCATCCTGTTTTCG
Downstream 100 bases:
>100_bases ACGTAAAATTGAGCTTTCGACCTCAGTTTTGCTATTTACTCGTTTTGCTATGAGCGCTGTTGCAAGCAGCGCGGTAGCGA TAAACGTTCAACACCACAAC
Product: hypothetical protein
Products: NA
Alternate protein names: PROX Protein; ABC Transporter Periplasmic Molybdate; ABC Transporter
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESV GGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYST GPSGVYLTEVFEHWGIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFLQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI
Sequences:
>Translated_272_residues MACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESV GGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYST GPSGVYLTEVFEHWGIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFLQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI >Mature_271_residues ACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFLTEVIAQFAQQSKYQVELESVG GVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRIDLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTG PSGVYLTEVFEHWGIAEQIKDRIVKVPPGVPVGSLVAKGEVELGFLQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPLK TNQQKAIKVLLDFLASPAATEAKIKNGMEPI
Specific function: Unknown
COG id: COG0725
COG function: function code P; ABC-type molybdate transport system, periplasmic component
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28947; Mature: 28816
Theoretical pI: Translated: 4.83; Mature: 4.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFL CEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH TEVIAQFAQQSKYQVELESVGGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRI HHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCH DLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFEHWGIAEQI HHHHCCEEEEEECCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHHHH KDRIVKVPPGVPVGSLVAKGEVELGFLQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL HHCEEECCCCCCHHHHEECCCCEEHHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCC KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC >Mature Secondary Structure ACLLAQYNSGDILMKYSNVIVSGLCMSMVSLATAAPTEVPSDEPVTLRIISSMATRQFL EEEEEEECCCCEEEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHH TEVIAQFAQQSKYQVELESVGGVDATKRVEAGEAFDVVILSANAIDKLIDSGKILPNSRI HHHHHHHHHCCCEEEEEECCCCCCCHHHCCCCCCEEEEEEEHHHHHHHHHCCCCCCCCCH DLVKSGVAIAVKEGAQIMDVSSEETVKQAVLAANTIAYSTGPSGVYLTEVFEHWGIAEQI HHHHCCEEEEEECCCEEEECCCHHHHHHHHHHHHHEEECCCCCCCHHHHHHHHCCHHHHH KDRIVKVPPGVPVGSLVAKGEVELGFLQLSELLHLKGIIILGPLPTDIQIMTHFSAGVPL HHCEEECCCCCCHHHHEECCCCEEHHHHHHHHHHHCCEEEECCCCCCEEEEEECCCCCCC KTNQQKAIKVLLDFLASPAATEAKIKNGMEPI CCCHHHHHHHHHHHHCCCCCHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA