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The map label for this gene is 22123958

Identifier: 22123958

GI number: 22123958

Start: 50781

End: 51281

Strand: Direct

Name: 22123958

Synonym: y0037

Alternate gene names: NA

Gene position: 50781-51281 (Clockwise)

Preceding gene: 22123956

Following gene: 22123959

Centisome position: 1.1

GC content: 43.91

Gene sequence:

>501_bases
GTGATGAGTAAAAATAAGCAAAGCAGTGTTGCCCCAAAAGAAAGGATTAACATCAAGTATGTGCCGAATACTGGCGACCA
GGTTGCAGAAATTGAATTACCGCTGAATCTGCTGGTTGTGGGTGATCTTAAAGGCGTGCGTGAAGAGACTTCAATTGAAG
AGCGTCAGGTTGTTTCGGTCAATAAGAATAACTTCAACTCAGTCATGAACGAAGCAAATATCAGTCTGAGTTTCAATGTG
CCTAATCGCCTTGAAGGTGATGGGGAAGAAGACATGCCGGTCGCCTTGTCGATCAAGGGTCTTGATGATTTCTCGCCTGA
CAATGTGGCGAAAAAAGTTCCAGAGCTCAAAAAAATTCTGGAACTACGGGAAGCGTTAGTGGCATTGAAAGGGCCATTGG
GGAATATCCCAGCTTTCCGCTCTCGTCTACAGGATTTGCTTGGCAATGAAGATATGCGCGAGCAGTTGCTGAAAGAATTG
GACATTCTTAATCAAAAATAA

Upstream 100 bases:

>100_bases
TTAACTATGCGCACAGTTGAGTCAGATTAATATAAGAACCTCCCTTTCTGCTGTGGGTGACATATTGGCTGACACCCCTT
ATTAGAGATTAAAAGGACGT

Downstream 100 bases:

>100_bases
TAGCTCTTCATCAAAAGTAATAGCTCTTCATCAAAAATAATAGCTCGGGTAAGAGGGAATTCTACGTATGCCTTTACATG
AAGAAAATACCGTTTTAGCG

Product: hypothetical protein

Products: NA

Alternate protein names: Type VI Secretion Protein Family; Type VI Secretion System Protein ImpB; Cytoplasmic Protein; Type VI Secretion Protein VasQ; Protein ImpB; Conserved Protein

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MMSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNV
PNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKEL
DILNQK

Sequences:

>Translated_166_residues
MMSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNV
PNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKEL
DILNQK
>Mature_166_residues
MMSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSVNKNNFNSVMNEANISLSFNV
PNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKILELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKEL
DILNQK

Specific function: Unknown

COG id: COG3516

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18522; Mature: 18522

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSV
CCCCCCCCCCCHHHHEEEEECCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCHHHEEEE
NKNNFNSVMNEANISLSFNVPNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKIL
CCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELDILNQK
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MMSKNKQSSVAPKERINIKYVPNTGDQVAEIELPLNLLVVGDLKGVREETSIEERQVVSV
CCCCCCCCCCCHHHHEEEEECCCCCCCEEEEECCEEEEEEECCCCCHHHCCCCHHHEEEE
NKNNFNSVMNEANISLSFNVPNRLEGDGEEDMPVALSIKGLDDFSPDNVAKKVPELKKIL
CCCHHHHHHHCCCEEEEECCCCCCCCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHH
ELREALVALKGPLGNIPAFRSRLQDLLGNEDMREQLLKELDILNQK
HHHHHHHHHCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA