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The map label for this gene is pepDB

Identifier: 21911299

GI number: 21911299

Start: 1782676

End: 1784175

Strand: Direct

Name: pepDB

Synonym: SpyM3_1763

Alternate gene names: 21911299

Gene position: 1782676-1784175 (Clockwise)

Preceding gene: 21911297

Following gene: 21911306

Centisome position: 93.8

GC content: 39.67

Gene sequence:

>1500_bases
ATGATAAACAAAAAAATATCACTTGGAGTTTTAAGTATTCTGACAGCCTTTTCGCTTCAAAGTGTTAGTTATGCTTGTAC
TGGTTTTATTATTGGCAAAGATTTAACCAAAGACGGTTCTCTTCTTTATGGTCGAACAGAAGATCTTGAGCCACATCATA
ATAAAAATTTCATTGTACGTCTAGCAAAGGACAATCCTGCTGGCGAAAAATGGAAAGACCCCTCTAATGGTTTTGAGTAC
CCGTTGCCTGAGCATTCTTATCGCTATAGTGCGATTCCTGATGTAACACCTAACAAAGGCGTTTATGACGAAGCTGGTTT
TAATGAGTTTGGCGTCTCTATGTCTGCAACAGTATCAACTTCAGCTAATGACGCCATCCAAAAAATTGATCCTTACGTCA
AAAATGGCTTAGCGGAATCATCTATGGCCAGTGTCATTTTACCAAGTGTCAAAACAGCCCGTGAAGGTGTCGCATTGATT
GCTAAAATAGTCACTGAAAAAGGAGCTGCTGAAGGAAATATTGTTACCTTGGCTGACAAAGACGGCATCTGGTACATGGA
AATTCTCTCTGGTCACCAATACGTTGCCATCAAATTCCCAGATGATAAATACGCTGTTTTTCCAAATACCTTCTATCTCG
GACATGTCGATTTCAACGATAAGGAAAATACGATTGCCTCAGAAGATGTGGAAAAAGTCGCTAAAAAAGCCAAATCTTAT
ACCGAAGTTGATGGTAAATTTCATATTGCCAAATCTTACAATCCACCACTAAACGATGCCAACCGCTCTCGCTCTTTCTC
AGGGATTAAATCACTTGACCCTGATTCAAAAGTAACTTATAAAGACAGCAATTATGAGTTGCTCCAAAGCACTGATAAGA
CCTTCAGTCTAGAAGATGCGATGAAACTGCAACGTAATCGTTTTGAGGGGCTGGATCTTAAACCACTTGATCAGATGGCA
TTAGACGGTAAGGGTAAACCAAAATCCAAAAAAGCTGTTAAAGGTTATGCTTATCCCATCTCAAATCCTAATGTCATGGA
AGCTCATATTTTCCAACTGAAAAAAGACATCCCTGCTGAATTGGGTGGTGGTGTCATGTGGTTATCTATTGGCAGTCCTC
GTAATGCCCCTTACTTGCCATACCTTGGCAATATCAGTAGAACCTATGAAGCCTATCAAGAAAAAAGCACCCAATATAAC
GATAAGTCATGGTATTGGACGGTGTCACACATTAATGATCTCGTGGCTGCTCATCCAAAACCATTTGGAACTAAAGTGAT
TGATGAGATGAAAGGCTTGGAAAAAACCTGGATAGCCGAACAAGACAAAACCACCAAAGAAATCAGTGACTTAGTCGTCA
GTGACCCCAAAGCTGCTCAAGAAAAAGCTGATAAGATTTCACTAGATCGCGCTGAAAAAACCTTCAAGCGCTTAAAAGCT
ATTGAAGCCAAGTTGGTTAAAGAAAAACCCAAAAACAAGAAAGGCTTGAATAGATCATAA

Upstream 100 bases:

>100_bases
ATAGCTAACAATTTCAAAACACTTCATAAAAAACTTGAATTTTTAAAAAGAGCATTTTATAATGTCTGTGAAAGCGTTAT
CGTTTACTAGGAGGATTCGC

Downstream 100 bases:

>100_bases
TACCATAACCCAAAAAAGCTTGTATCAACAAGTTTCTCCATAACTAGAGCTGAAGTCAAAAAATAAGGTCTCACACTTTG
TGAGACCTTATCGGTATAGG

Product: putative dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVRLAKDNPAGEKWKDPSNGFEY
PLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSTSANDAIQKIDPYVKNGLAESSMASVILPSVKTAREGVALI
AKIVTEKGAAEGNIVTLADKDGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDAMKLQRNRFEGLDLKPLDQMA
LDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAELGGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYN
DKSWYWTVSHINDLVAAHPKPFGTKVIDEMKGLEKTWIAEQDKTTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKA
IEAKLVKEKPKNKKGLNRS

Sequences:

>Translated_499_residues
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVRLAKDNPAGEKWKDPSNGFEY
PLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSTSANDAIQKIDPYVKNGLAESSMASVILPSVKTAREGVALI
AKIVTEKGAAEGNIVTLADKDGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDAMKLQRNRFEGLDLKPLDQMA
LDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAELGGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYN
DKSWYWTVSHINDLVAAHPKPFGTKVIDEMKGLEKTWIAEQDKTTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKA
IEAKLVKEKPKNKKGLNRS
>Mature_499_residues
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVRLAKDNPAGEKWKDPSNGFEY
PLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVSTSANDAIQKIDPYVKNGLAESSMASVILPSVKTAREGVALI
AKIVTEKGAAEGNIVTLADKDGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDAMKLQRNRFEGLDLKPLDQMA
LDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAELGGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYN
DKSWYWTVSHINDLVAAHPKPFGTKVIDEMKGLEKTWIAEQDKTTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKA
IEAKLVKEKPKNKKGLNRS

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): PEPDB_STRP3 (Q8K5M7)

Other databases:

- EMBL:   AE014074
- EMBL:   BA000034
- RefSeq:   NP_665567.1
- RefSeq:   NP_803022.1
- ProteinModelPortal:   Q8K5M7
- EnsemblBacteria:   EBSTRT00000034106
- EnsemblBacteria:   EBSTRT00000036707
- GeneID:   1010078
- GeneID:   1065099
- GenomeReviews:   AE014074_GR
- GenomeReviews:   BA000034_GR
- KEGG:   spg:SpyM3_1763
- KEGG:   sps:SPs1760
- GeneTree:   EBGT00050000026738
- HOGENOM:   HBG697232
- OMA:   AKSYTEV
- ProtClustDB:   CLSK877316
- BioCyc:   SPYO193567:SPS1760-MONOMER
- BioCyc:   SPYO198466:SPYM3_1763-MONOMER
- GO:   GO:0006508
- InterPro:   IPR005322

Pfam domain/function: PF03577 Peptidase_C69

EC number: NA

Molecular weight: Translated: 55554; Mature: 55554

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: ACT_SITE 26-26

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVR
CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEE
LAKDNPAGEKWKDPSNGFEYPLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVST
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECC
SANDAIQKIDPYVKNGLAESSMASVILPSVKTAREGVALIAKIVTEKGAAEGNIVTLADK
CHHHHHHHHCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
DGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
CCEEEEEEECCCEEEEEEECCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDA
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCHHHH
MKLQRNRFEGLDLKPLDQMALDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAE
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHH
LGGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPK
HCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCC
PFGTKVIDEMKGLEKTWIAEQDKTTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKA
CCCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEAKLVKEKPKNKKGLNRS
HHHHHHHHCCCCCCCCCCC
>Mature Secondary Structure
MINKKISLGVLSILTAFSLQSVSYACTGFIIGKDLTKDGSLLYGRTEDLEPHHNKNFIVR
CCCCCHHHHHHHHHHHHHHHHHHHEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCEEEE
LAKDNPAGEKWKDPSNGFEYPLPEHSYRYSAIPDVTPNKGVYDEAGFNEFGVSMSATVST
EECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCEEEEEECC
SANDAIQKIDPYVKNGLAESSMASVILPSVKTAREGVALIAKIVTEKGAAEGNIVTLADK
CHHHHHHHHCHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCEEEEECC
DGIWYMEILSGHQYVAIKFPDDKYAVFPNTFYLGHVDFNDKENTIASEDVEKVAKKAKSY
CCEEEEEEECCCEEEEEEECCCCEEECCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHH
TEVDGKFHIAKSYNPPLNDANRSRSFSGIKSLDPDSKVTYKDSNYELLQSTDKTFSLEDA
HCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEECCCHHHHHCCCCCCCHHHH
MKLQRNRFEGLDLKPLDQMALDGKGKPKSKKAVKGYAYPISNPNVMEAHIFQLKKDIPAE
HHHHHHHCCCCCCCCHHHHHCCCCCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHCCCHH
LGGGVMWLSIGSPRNAPYLPYLGNISRTYEAYQEKSTQYNDKSWYWTVSHINDLVAAHPK
HCCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEHHHHHHHHHCCCC
PFGTKVIDEMKGLEKTWIAEQDKTTKEISDLVVSDPKAAQEKADKISLDRAEKTFKRLKA
CCCHHHHHHHHCCHHHHCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH
IEAKLVKEKPKNKKGLNRS
HHHHHHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 12122206; 12799345