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The map label for this gene is int315.6 [H]

Identifier: 21910994

GI number: 21910994

Start: 1449370

End: 1450458

Strand: Direct

Name: int315.6 [H]

Synonym: SpyM3_1458

Alternate gene names: 21910994

Gene position: 1449370-1450458 (Clockwise)

Preceding gene: 21910993

Following gene: 21911013

Centisome position: 76.26

GC content: 37.19

Gene sequence:

>1089_bases
ATGATTGAAAAATACACTAAAAAAGATGGCACAACTGCCTATCGCTTAAGAGCATATCTCGGGGTTGATCCCATGACTGG
TAAACAAGTCAGGACAACTAGACAAGGTTTTAAAACAGAAAGAGAAGCTAAAAGAACAGAGGTAAAACTGGTTGATGATT
TTCAGCGTCAAGGCGCTTGGAAAAACAATGATAAGACTACATTTGATGACGCAGCCAGACTGTGGTTTGAGCAGTATAAG
AATACAGTCAAACCGTCAACATTTCTGGTTAACCAAAACTACTATAAATCAACAATAAAACCGCATATTGGTAAATCACA
AATCAGTAAAATAACAGTTATGGCCTGTCAAAACTTAATCAACCACTTAGCACAATATAGCGCATGCGCTAGCTACATCA
GTGTTATCAACAGGATTTTTAAGTTTGCAGTACATTTAGGAATTATTGAGAATAACCCAATGGATAGGACAATAAGGGCT
AGATGTACCTATGCCCATAAAGAAAAAATGTTCTACTCTAAGGAGGAATTACTAATCTTTTTGGATATTGTTAAAAAAGA
AGAGAGTCTAGAAATGTTGTTAATCTACCGGTTATTAGCCTATGGTGGACTAAGAATTGGTGAGGCTGTTGCCTTATATG
ATACTGATTTTGATTTTACCAATAACACTATCAGTATAACAAAAACTTTAGCACAAACCAAGGCAGGTAAGGTCATTCAA
AATCCCAAAACTAAAAAAAGCAGTCGCACTATCTCCATGGATCAGGAAACAATGCGACTGGCTAAGGAGTATATGAGGCA
GAGTGTCAGACCGCTACATGGGTCTTTTAGAGTATTTAATCTGCTTACAAGCACGGTTAGACGTAGGCTTAAAAGAACCG
TTGAACGGCATCATCTAAAAAAAATAAACCCTCATGGATTTAGACATACTCACGCATCATTGCTATTTGAGGCGGGAGTT
CCTGCAAAGCTAGCACAAGAACGTCTAGGTCATGCCAAGATATCAATTACAATGGATTTATACACCCACCTATCTAAAAA
TCAAACCGATAATGTAGCTGAGAAGCTAGCTGATTTTATCGCAATTTAA

Upstream 100 bases:

>100_bases
CTCATTTTCTTATACTCTGAATTATATCACACAAAGGAGGTGATGCCAATATCCTATCTCAAAATCAGCACTCCCTAGCG
CGAAGAGAGAGGAAAAAACA

Downstream 100 bases:

>100_bases
CACGAACGTAGTAAAAAACGTAGTAAGTCGAATTTTTGGATTTAGAAACCCATTGATTTCAAGGGATTTCTAAGGTGTGA
TGATATTATAGCATAAAAAA

Product: putative integrase - phage associated

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAWKNNDKTTFDDAARLWFEQYK
NTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLINHLAQYSACASYISVINRIFKFAVHLGIIENNPMDRTIRA
RCTYAHKEKMFYSKEELLIFLDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGKVIQ
NPKTKKSSRTISMDQETMRLAKEYMRQSVRPLHGSFRVFNLLTSTVRRRLKRTVERHHLKKINPHGFRHTHASLLFEAGV
PAKLAQERLGHAKISITMDLYTHLSKNQTDNVAEKLADFIAI

Sequences:

>Translated_362_residues
MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAWKNNDKTTFDDAARLWFEQYK
NTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLINHLAQYSACASYISVINRIFKFAVHLGIIENNPMDRTIRA
RCTYAHKEKMFYSKEELLIFLDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGKVIQ
NPKTKKSSRTISMDQETMRLAKEYMRQSVRPLHGSFRVFNLLTSTVRRRLKRTVERHHLKKINPHGFRHTHASLLFEAGV
PAKLAQERLGHAKISITMDLYTHLSKNQTDNVAEKLADFIAI
>Mature_362_residues
MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAWKNNDKTTFDDAARLWFEQYK
NTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLINHLAQYSACASYISVINRIFKFAVHLGIIENNPMDRTIRA
RCTYAHKEKMFYSKEELLIFLDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGKVIQ
NPKTKKSSRTISMDQETMRLAKEYMRQSVRPLHGSFRVFNLLTSTVRRRLKRTVERHHLKKINPHGFRHTHASLLFEAGV
PAKLAQERLGHAKISITMDLYTHLSKNQTDNVAEKLADFIAI

Specific function: Putative integrase that is involved in the insertion of the integrative and conjugative element ICEBs1. Required for the excision of ICEBs1 from the donor cell genome and subsequent integration in the recipient cell genome. Appears not to be transferred t

COG id: COG0582

COG function: function code L; Integrase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 'phage' integrase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011010
- InterPro:   IPR013762
- InterPro:   IPR002104
- InterPro:   IPR023109 [H]

Pfam domain/function: PF00589 Phage_integrase [H]

EC number: NA

Molecular weight: Translated: 41840; Mature: 41840

Theoretical pI: Translated: 10.48; Mature: 10.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAW
CCCCCCCCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KNNDKTTFDDAARLWFEQYKNTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLI
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHH
NHLAQYSACASYISVINRIFKFAVHLGIIENNPMDRTIRARCTYAHKEKMFYSKEELLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHEEE
LDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGKVIQ
EEHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCHHC
NPKTKKSSRTISMDQETMRLAKEYMRQSVRPLHGSFRVFNLLTSTVRRRLKRTVERHHLK
CCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KINPHGFRHTHASLLFEAGVPAKLAQERLGHAKISITMDLYTHLSKNQTDNVAEKLADFI
CCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEHHHHHHHCCCCCHHHHHHHHHHH
AI
CC
>Mature Secondary Structure
MIEKYTKKDGTTAYRLRAYLGVDPMTGKQVRTTRQGFKTEREAKRTEVKLVDDFQRQGAW
CCCCCCCCCCCHHEEEHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KNNDKTTFDDAARLWFEQYKNTVKPSTFLVNQNYYKSTIKPHIGKSQISKITVMACQNLI
CCCCCCCHHHHHHHHHHHHHCCCCCCEEEEECCHHHHHCCCCCCHHHHHHHHHHHHHHHH
NHLAQYSACASYISVINRIFKFAVHLGIIENNPMDRTIRARCTYAHKEKMFYSKEELLIF
HHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHCCHHHHEEE
LDIVKKEESLEMLLIYRLLAYGGLRIGEAVALYDTDFDFTNNTISITKTLAQTKAGKVIQ
EEHHHCHHHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEHHHHHHHHHHCCCHHC
NPKTKKSSRTISMDQETMRLAKEYMRQSVRPLHGSFRVFNLLTSTVRRRLKRTVERHHLK
CCCCCCCCCEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
KINPHGFRHTHASLLFEAGVPAKLAQERLGHAKISITMDLYTHLSKNQTDNVAEKLADFI
CCCCCCCCHHHHHHHHHCCCCHHHHHHHCCCEEEEEEHHHHHHHCCCCCHHHHHHHHHHH
AI
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]