Click here to switch to the map view.

The map label for this gene is 21910659

Identifier: 21910659

GI number: 21910659

Start: 1159721

End: 1160065

Strand: Reverse

Name: 21910659

Synonym: SpyM3_1123

Alternate gene names: NA

Gene position: 1160065-1159721 (Counterclockwise)

Preceding gene: 21910660

Following gene: 21910658

Centisome position: 61.04

GC content: 41.45

Gene sequence:

>345_bases
ATGTCTCAATTAAGGGCAGATAAAAAAGGTACTCACAGGGTAGCATTTGAAAAGAATAAGCGAAAGCTGTTAAAGACTAC
CAACCTCTGTGGTATCTGTGGTAAGCCAGTCGATAAGACACTGAAGTATCCTCACCCGCTTAGCGCAGCAATAGATCACA
TAGTTCCTATTGCAAAAGGTGGACATCCGTCAGCGCTAGAGAACTTACAACTTACACATTGGCAATGTAATAGGCAGAAG
TCTGACAAGTTGTTCGCTAACCAAGCAAGCAACGAGCCAAAGACAATAGGAAATAGAAACCTTCCTCAAAGTCGAGACTG
GTCATCTTTTACATTAAAAAAGTGA

Upstream 100 bases:

>100_bases
TAACAGTGCATGACAGTTTTAAAGTGATAATATAGTATTATCAAGAAATGAGGGACAGGTAAGAAAATACCCCCCTCTTT
TAAATTTAGAAAGGCCCCCT

Downstream 100 bases:

>100_bases
ATTTGTGCAAATTATTGATTTATGCTAAAACTGGTCAGAAGCTAAACGGGGGGTATGGCCCTCCCCGGTCGGCCGGCCGA
GCTTCACGCCGTCACTGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Phage HNH Endonuclease; HNH Endonuclease Domain Protein; Prophage; HNH Nuclease

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSQLRADKKGTHRVAFEKNKRKLLKTTNLCGICGKPVDKTLKYPHPLSAAIDHIVPIAKGGHPSALENLQLTHWQCNRQK
SDKLFANQASNEPKTIGNRNLPQSRDWSSFTLKK

Sequences:

>Translated_114_residues
MSQLRADKKGTHRVAFEKNKRKLLKTTNLCGICGKPVDKTLKYPHPLSAAIDHIVPIAKGGHPSALENLQLTHWQCNRQK
SDKLFANQASNEPKTIGNRNLPQSRDWSSFTLKK
>Mature_113_residues
SQLRADKKGTHRVAFEKNKRKLLKTTNLCGICGKPVDKTLKYPHPLSAAIDHIVPIAKGGHPSALENLQLTHWQCNRQKS
DKLFANQASNEPKTIGNRNLPQSRDWSSFTLKK

Specific function: Unknown

COG id: COG1403

COG function: function code V; Restriction endonuclease

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12842; Mature: 12711

Theoretical pI: Translated: 10.86; Mature: 10.86

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.6 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSQLRADKKGTHRVAFEKNKRKLLKTTNLCGICGKPVDKTLKYPHPLSAAIDHIVPIAKG
CCCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCC
GHPSALENLQLTHWQCNRQKSDKLFANQASNEPKTIGNRNLPQSRDWSSFTLKK
CCCCHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SQLRADKKGTHRVAFEKNKRKLLKTTNLCGICGKPVDKTLKYPHPLSAAIDHIVPIAKG
CCCCCCCCCCEEEEEECCHHHHHHHCCCCCCCCCCCHHHCCCCCCHHHHHHHHHCCCCC
GHPSALENLQLTHWQCNRQKSDKLFANQASNEPKTIGNRNLPQSRDWSSFTLKK
CCCCHHHCCCCCEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA