Click here to switch to the map view.

The map label for this gene is yrrM [H]

Identifier: 21910596

GI number: 21910596

Start: 1102625

End: 1103257

Strand: Reverse

Name: yrrM [H]

Synonym: SpyM3_1060

Alternate gene names: 21910596

Gene position: 1103257-1102625 (Counterclockwise)

Preceding gene: 21910597

Following gene: 21910595

Centisome position: 58.05

GC content: 39.18

Gene sequence:

>633_bases
ATGCGAACACGGCAGAAGCAAACCACAGGTTTTTTAGCAGAGTTAGAGCAATTCGCAAGACAAGAAAACATTCCTATTAT
TCAGCCTGAGGTCGTGGCTTATTTCAGGTTTTTATTGCAAAGCTTACAGCCAAAACACATTTTGGAGATTGGCACAGCCA
TTGGTTTTTCTGCGCTTTTAATGGCTGAAAATGCACCAGATGCGACGATTGTGACTATTGATCGTAATCGAGAGATGATC
GATTTTGCTAAAGCAAATTTTGCTAAGTACGACAGTCGCCAACAGATCCGCCTGTTAGAAGGAGATGCAGCAGATATATT
ATCTACACTTGAAGGAAATTTTGACTTTGTGTTTATGGATTCCGCCAAATCCAAATATATTGTCTTTCTACCAGAGATTT
TAAGACTGTTAAGAGTCGGTGGTGTAGTCATTTTGGATGATGTCTTTCAAGGAGGTGACATTACAAAACCGATCGAAGAT
ATTCGACGAGGTCAGCGTACTATTTATCGTGGCTTACAGTCTTTGTTTGATGCCACCTTAACTCATCCAAATCTAACAAC
TAGCCTGGTCCCTCTTAGTGATGGATTATTAATGATTCGTAAAAATCAAGCAGATATTGTATTACCAGATTAA

Upstream 100 bases:

>100_bases
AGGGTTTTTTTATATAATTAGGTTTATGGTTAAATCATACAGTAAAACAGCAAATCATAATATGCGTCGTCCTGTTGTCA
AAGAAGAGCTTGTTCATTAT

Downstream 100 bases:

>100_bases
GTAACATTGATAAATTTATGTTATAATAAATTAGTTAAAGATAAAAAGGAGCTCAGAAGTAAATGAAAAACTCAAATAAA
CTCATTGCTAGTGTTGTGAC

Product: O-methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 210; Mature: 210

Protein sequence:

>210_residues
MRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIGFSALLMAENAPDATIVTIDRNREMI
DFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILRLLRVGGVVILDDVFQGGDITKPIED
IRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD

Sequences:

>Translated_210_residues
MRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIGFSALLMAENAPDATIVTIDRNREMI
DFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILRLLRVGGVVILDDVFQGGDITKPIED
IRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD
>Mature_210_residues
MRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIGFSALLMAENAPDATIVTIDRNREMI
DFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMDSAKSKYIVFLPEILRLLRVGGVVILDDVFQGGDITKPIED
IRRGQRTIYRGLQSLFDATLTHPNLTTSLVPLSDGLLMIRKNQADIVLPD

Specific function: Unknown

COG id: COG4122

COG function: function code R; Predicted O-methyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. Type 3 family [H]

Homologues:

Organism=Caenorhabditis elegans, GI72001028, Length=182, Percent_Identity=29.1208791208791, Blast_Score=70, Evalue=5e-13,
Organism=Caenorhabditis elegans, GI72001127, Length=181, Percent_Identity=27.0718232044199, Blast_Score=68, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17565612, Length=187, Percent_Identity=27.807486631016, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI25148771, Length=181, Percent_Identity=26.5193370165746, Blast_Score=67, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002935 [H]

Pfam domain/function: PF01596 Methyltransf_3 [H]

EC number: NA

Molecular weight: Translated: 23699; Mature: 23699

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIGFSALL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHE
MAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMD
EECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCEEEEE
SAKSKYIVFLPEILRLLRVGGVVILDDVFQGGDITKPIEDIRRGQRTIYRGLQSLFDATL
CCCCCEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
THPNLTTSLVPLSDGLLMIRKNQADIVLPD
CCCCCCEEEEECCCCEEEEEECCCCEECCC
>Mature Secondary Structure
MRTRQKQTTGFLAELEQFARQENIPIIQPEVVAYFRFLLQSLQPKHILEIGTAIGFSALL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHE
MAENAPDATIVTIDRNREMIDFAKANFAKYDSRQQIRLLEGDAADILSTLEGNFDFVFMD
EECCCCCCEEEEEECCCCHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHHCCCCCEEEEE
SAKSKYIVFLPEILRLLRVGGVVILDDVFQGGDITKPIEDIRRGQRTIYRGLQSLFDATL
CCCCCEEEEHHHHHHHHHHCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
THPNLTTSLVPLSDGLLMIRKNQADIVLPD
CCCCCCEEEEECCCCEEEEEECCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]