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The map label for this gene is rgpEc [C]

Identifier: 21910062

GI number: 21910062

Start: 580151

End: 581158

Strand: Direct

Name: rgpEc [C]

Synonym: SpyM3_0526

Alternate gene names: 21910062

Gene position: 580151-581158 (Clockwise)

Preceding gene: 21910061

Following gene: 21910063

Centisome position: 30.53

GC content: 32.24

Gene sequence:

>1008_bases
ATGTATAAAGTTTCAATTATTTGCACCAATTATAACAAAGCTCCTTGGATATCTGATGCACTTGACAGTTTTTTAAGCCA
AGTGACAGATTTTGAGGTTGAAATTATTGTTATTGATGATGCTTCTACAGATGACTCACGAGAGATTTTAAAGAGTTATC
AAAAAAAGTCTTCAGGAAAAATTAAATTACTCTTTAACGAAACTAATATTGGAATAACAAAGACTTGGATAAAAGCATGC
CTTTATGCAAAAGGCAAATATATTGCTAGATGTGATGGTGATGATTACTGGACGGATAGTTTTAAACTCCAAAAACAAGT
TGATGTCTTAGAAGCTTCCAAACGGTCACGATGGTGTAATACTGATTTTGACTTTGTAAATAGTCAAGGCGACTTATTAT
ATGCTAATGCTTTTTCATCTGGTCATACACCTTTGACAGATACTTACGAAAAAGTTTTAGCCTTAAAAGGGATGACGATG
GCATCGACATGGTTAGTTGATGCTGATTTAATGAGACAAGTAAACCAAAAAATCAATGTAGATACACCAGACGATACTTT
TGATATTCAACTAGAGTTATTTCAACTGACTCAACTGACCTATATTAAAGACTCAACGACGATTTATCGCATGACAACCG
ATTCTGATTCAAGACCTACTGATACACCAAAAATGATTCATCGTATTCAAAAACTACTTGATACTCAGTTAAATTACTTA
AAAAAGTATAATCAGGTAGATACAAAAGAAGTGTCTAAACTATTATTACAACAAGATGCTAAGCAAGAAATACGAATTCA
TGAGTTGAGTTGCTTTATTCAAGAATTACAACAAACTATCGTAGATAAAACAAAGCAGCAAGAAACACGTGAAGTGGAGT
TGCAAAATGTCATAGAAGAACAAAAAAATCAACTATCTGAATTAAGACAACAATACCATGCCATTATTAATTCACGTCAA
TGGAAATACACGTCTAAGCTCATTGCTTTTATTAGGAGAAAAAAATGA

Upstream 100 bases:

>100_bases
TGATCAAGATGATCTGTCAGCTCTAGATTCAGCAAGTGGCTTGTATCAACGTAATGGGAAGTGGGTTTTTCATTAATGAG
TAATAGCTAGAAGGGAATTT

Downstream 100 bases:

>100_bases
ATCGTATTTTATTATATGTTCACTTCAACAAATACAATAAAATAAGTGCACATGTTTACTATCAATTGGAACAAATGAGA
TCACTGTTTTCTAAGATTGT

Product: putative glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MYKVSIICTNYNKAPWISDALDSFLSQVTDFEVEIIVIDDASTDDSREILKSYQKKSSGKIKLLFNETNIGITKTWIKAC
LYAKGKYIARCDGDDYWTDSFKLQKQVDVLEASKRSRWCNTDFDFVNSQGDLLYANAFSSGHTPLTDTYEKVLALKGMTM
ASTWLVDADLMRQVNQKINVDTPDDTFDIQLELFQLTQLTYIKDSTTIYRMTTDSDSRPTDTPKMIHRIQKLLDTQLNYL
KKYNQVDTKEVSKLLLQQDAKQEIRIHELSCFIQELQQTIVDKTKQQETREVELQNVIEEQKNQLSELRQQYHAIINSRQ
WKYTSKLIAFIRRKK

Sequences:

>Translated_335_residues
MYKVSIICTNYNKAPWISDALDSFLSQVTDFEVEIIVIDDASTDDSREILKSYQKKSSGKIKLLFNETNIGITKTWIKAC
LYAKGKYIARCDGDDYWTDSFKLQKQVDVLEASKRSRWCNTDFDFVNSQGDLLYANAFSSGHTPLTDTYEKVLALKGMTM
ASTWLVDADLMRQVNQKINVDTPDDTFDIQLELFQLTQLTYIKDSTTIYRMTTDSDSRPTDTPKMIHRIQKLLDTQLNYL
KKYNQVDTKEVSKLLLQQDAKQEIRIHELSCFIQELQQTIVDKTKQQETREVELQNVIEEQKNQLSELRQQYHAIINSRQ
WKYTSKLIAFIRRKK
>Mature_335_residues
MYKVSIICTNYNKAPWISDALDSFLSQVTDFEVEIIVIDDASTDDSREILKSYQKKSSGKIKLLFNETNIGITKTWIKAC
LYAKGKYIARCDGDDYWTDSFKLQKQVDVLEASKRSRWCNTDFDFVNSQGDLLYANAFSSGHTPLTDTYEKVLALKGMTM
ASTWLVDADLMRQVNQKINVDTPDDTFDIQLELFQLTQLTYIKDSTTIYRMTTDSDSRPTDTPKMIHRIQKLLDTQLNYL
KKYNQVDTKEVSKLLLQQDAKQEIRIHELSCFIQELQQTIVDKTKQQETREVELQNVIEEQKNQLSELRQQYHAIINSRQ
WKYTSKLIAFIRRKK

Specific function: Unknown

COG id: COG0463

COG function: function code M; Glycosyltransferases involved in cell wall biogenesis

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 39119; Mature: 39119

Theoretical pI: Translated: 6.92; Mature: 6.92

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYKVSIICTNYNKAPWISDALDSFLSQVTDFEVEIIVIDDASTDDSREILKSYQKKSSGK
CEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCE
IKLLFNETNIGITKTWIKACLYAKGKYIARCDGDDYWTDSFKLQKQVDVLEASKRSRWCN
EEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC
TDFDFVNSQGDLLYANAFSSGHTPLTDTYEKVLALKGMTMASTWLVDADLMRQVNQKINV
CCCHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCC
DTPDDTFDIQLELFQLTQLTYIKDSTTIYRMTTDSDSRPTDTPKMIHRIQKLLDTQLNYL
CCCCCCEEEEEEEEHHHHHEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
KKYNQVDTKEVSKLLLQQDAKQEIRIHELSCFIQELQQTIVDKTKQQETREVELQNVIEE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNQLSELRQQYHAIINSRQWKYTSKLIAFIRRKK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC
>Mature Secondary Structure
MYKVSIICTNYNKAPWISDALDSFLSQVTDFEVEIIVIDDASTDDSREILKSYQKKSSGK
CEEEEEEEECCCCCCCHHHHHHHHHHHHCCCEEEEEEEECCCCCHHHHHHHHHHHCCCCE
IKLLFNETNIGITKTWIKACLYAKGKYIARCDGDDYWTDSFKLQKQVDVLEASKRSRWCN
EEEEEECCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCC
TDFDFVNSQGDLLYANAFSSGHTPLTDTYEKVLALKGMTMASTWLVDADLMRQVNQKINV
CCCHHCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCC
DTPDDTFDIQLELFQLTQLTYIKDSTTIYRMTTDSDSRPTDTPKMIHRIQKLLDTQLNYL
CCCCCCEEEEEEEEHHHHHEEEECCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
KKYNQVDTKEVSKLLLQQDAKQEIRIHELSCFIQELQQTIVDKTKQQETREVELQNVIEE
HHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
QKNQLSELRQQYHAIINSRQWKYTSKLIAFIRRKK
HHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]