Click here to switch to the map view.

The map label for this gene is atpC [H]

Identifier: 21910036

GI number: 21910036

Start: 551516

End: 551932

Strand: Direct

Name: atpC [H]

Synonym: SpyM3_0500

Alternate gene names: 21910036

Gene position: 551516-551932 (Clockwise)

Preceding gene: 21910035

Following gene: 21910037

Centisome position: 29.02

GC content: 42.21

Gene sequence:

>417_bases
ATGACACAAATGACTGTTCAAGTGGTAACGCCAGATGGAATCAAATATGATCACCATGCTAAATGTATTTCTGTAACAAC
ACCAGATGGGGAAATGGGGATTTTACCTAATCACATCAATTTAATTGCACCTTTGCAAGTCCATGAAATGAAAATTCGCC
GAGGTGGTGAAGATGAAAAAGTGGACTGGATTGCTATCAATGGTGGTATTATTGAAATCAAAGATAATGTGGTTACCGTT
GTCGCTGATTCTGCAGAACGTGACCGTGATATCGATGTCAGCCGAGCAGAGCGAGCAAAACTAAGAGCAGAACGTGAAAT
TGCACAGGCTGAAACGACCCACAACATTGATGAAGTTCGTCGTGCCAAGGTTGCCTTGCGCCGCGCTTTGAATCGTATCA
ACGTTAGTAAAAAGTAA

Upstream 100 bases:

>100_bases
AAAATACGATGATCTTCCAGAAGACGCCTTTCGTTCAGTTGGTCCAATCGAGGATGTGATTAAAAAAGCCGAAAAAATGG
GCTTTTAGTGAGGTGATGCC

Downstream 100 bases:

>100_bases
GTGGTGTTGATAAAAGACAAGGATAAGTAAGAAAGGTTTTTAACCTATTATTTTGTTTGCTGAGTCTTTTTAACATCAGT
TTCTGAGAGTTTGACCATAC

Product: F0F1 ATP synthase subunit epsilon

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F1 sector epsilon subunit; F-ATPase epsilon subunit [H]

Number of amino acids: Translated: 138; Mature: 137

Protein sequence:

>138_residues
MTQMTVQVVTPDGIKYDHHAKCISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEKVDWIAINGGIIEIKDNVVTV
VADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVRRAKVALRRALNRINVSKK

Sequences:

>Translated_138_residues
MTQMTVQVVTPDGIKYDHHAKCISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEKVDWIAINGGIIEIKDNVVTV
VADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVRRAKVALRRALNRINVSKK
>Mature_137_residues
TQMTVQVVTPDGIKYDHHAKCISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEKVDWIAINGGIIEIKDNVVTVV
ADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVRRAKVALRRALNRINVSKK

Specific function: Produces ATP from ADP in the presence of a proton gradient across the membrane [H]

COG id: COG0355

COG function: function code C; F0F1-type ATP synthase, epsilon subunit (mitochondrial delta subunit)

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase epsilon chain family [H]

Homologues:

Organism=Escherichia coli, GI1790169, Length=114, Percent_Identity=34.2105263157895, Blast_Score=65, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001469
- InterPro:   IPR020547
- InterPro:   IPR020546
- ProDom:   PD000944 [H]

Pfam domain/function: PF00401 ATP-synt_DE; PF02823 ATP-synt_DE_N [H]

EC number: 3.6.3.14

Molecular weight: Translated: 15496; Mature: 15365

Theoretical pI: Translated: 7.73; Mature: 7.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQMTVQVVTPDGIKYDHHAKCISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEK
CCEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEHHHCCCCCCC
VDWIAINGGIIEIKDNVVTVVADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVR
EEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
RAKVALRRALNRINVSKK
HHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
TQMTVQVVTPDGIKYDHHAKCISVTTPDGEMGILPNHINLIAPLQVHEMKIRRGGEDEK
CEEEEEEECCCCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCEEEEHHHCCCCCCC
VDWIAINGGIIEIKDNVVTVVADSAERDRDIDVSRAERAKLRAEREIAQAETTHNIDEVR
EEEEEECCCEEEEECCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHH
RAKVALRRALNRINVSKK
HHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: Borate; diphosphate; HCO3- [C]

Metal ions: Co2+; Fe2+; Mn2+; Zn2+ [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: Phosphorous acid anhydride hydrolysis [C]

Inhibitor: Ca2+; CN-; Efrapeptin; Ethidiumbromide; Guanidines analogs; Oligomycin; Quercetin; Trialkyl tin derivatives; Venturicidin [C]

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA