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The map label for this gene is pepD [H]

Identifier: 21910001

GI number: 21910001

Start: 511634

End: 513031

Strand: Direct

Name: pepD [H]

Synonym: SpyM3_0465

Alternate gene names: 21910001

Gene position: 511634-513031 (Clockwise)

Preceding gene: 21910000

Following gene: 21910002

Centisome position: 26.92

GC content: 42.56

Gene sequence:

>1398_bases
ATGGCATGTACAACTATACTCGTCGGTAAAAAGGCATCTTATGATGGCTCAACCATGGTTGCTCGAACAGAAGATTCTCA
AAATGGTGATTTCACGCCTAAAAAAATGATTGTGGTGAAACCAGAAGATCAACCGAGACATTACCGTTCGGTGCAATCTT
CCTTTGAAATGGACTTACCGGACAATCCCATGACTTACACGTCTGTTCCCGATGCGCTTGGTAAAGATGGTATCTGGGCA
GAAGCAGGCGTGAACGAGGCTAATGTGGCCATGTCAGCAACTGAAACCATCACTACCAATTCTCGTGTTTTAGGGGCAGA
TCCTCTAGTAGCTTCTGGTATTGGTGAGGAGGACATGGTGACCTTAGTGCTCCCTTATATCCGTTCTGCGCGTGAAGGGG
TTTTGCGCCTTGGTGCCATTTTAGAAGACTATGGCACTTACGAGTCAAATGGTGTGGCTTTTTCAGATGAACATGACATT
TGGTGGCTGGAAACGATTGGTGGTCATCACTGGATTGCAAGACGGGTGCCAGATGATGCTTATGTCACCAATCCCAATCA
ATTTGGCATTGATCATTTTGAATTTAACAATCCTGAAGATTACCTTTGCTCAGCTGATTTAAAGGACTTTATTGACACGT
ATCACTTAGATTTAACCTATAGCCATGAGCATTTTAATCCGCGCTATGCCTTTGGTAGTCAACGTGACAAAGACCGTCAG
TATAATACGCCACGTGTTTGGATCATGCAAAAATTCTTAAACCCAGAAATTGTGCAAGACCCGCGCAGCTTTGCCCTTGC
TTGGTGTCAAAAACCTTACCGTAAAATAACAGTAGAAGATGTCAAATATGTATTGAGTAGTCACTATCAGGACACGGTTT
ATGACCCTTACGGTTCAGAAGGAACTCCTGTTAGTAAGAAAGTCTTTCGCCCTATTGGCATTAACCGTACCAGCCAAACC
GCTATCTTACACATTCGTCCTAATAAACCTCAAGAAATTGCCGCTATTCAATGGATGGCTTATGGGTCAATGCCATTTAA
TACCATGGTGCCTTTTTTCACACAGGTGAAGACTATTCCAGATTATTTTGCCAACACTTACGAAAATGTGTCTACCGATA
ATTTTTATTGGACCAATCGCTTGATTGCGGCTTTGGCAGATCCTCACTACAATCATCATGAAACTGATTTGGACAATTAT
TTGGAAGAAACCATGGCAAAAGGTCATGCCATGTTACATGCTGTGGAAGCACAGTTATTGGCTGGTGAAACAGTCGATTT
GGAAGAGGAAAATCAAAAAATGAGTGACTATGTGCAAGGAGAAACGCAGACGCTGTTGAACAAGATTCTCTTTGACGCTA
GCAATCTAATGACCAATCGTTTCAGTTTGAGCGATTAA

Upstream 100 bases:

>100_bases
GATTTTTTTGTCTAAAAGTCGTTTTCCATTGTTTTTTTGAAGTGTCTGATGTTCTGTGATATGATAAAAGGGATAATAAC
GTTTGTAAAGGAGACTGATA

Downstream 100 bases:

>100_bases
AAGTGAAGCTAAGGCTGAGCAACTGCTTAGCCTTTTTTACGATAACTTTTTAGGAAAAGTAATCGCAAAAAGACAAAAAC
TTGGAAAAAAAATCAAAGTA

Product: putative dipeptidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 465; Mature: 464

Protein sequence:

>465_residues
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWA
EAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDI
WWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
YNTPRVWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSEGTPVSKKVFRPIGINRTSQT
AILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNY
LEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Sequences:

>Translated_465_residues
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWA
EAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDI
WWLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
YNTPRVWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSEGTPVSKKVFRPIGINRTSQT
AILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNY
LEETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
>Mature_464_residues
ACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLPDNPMTYTSVPDALGKDGIWAE
AGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMVTLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIW
WLETIGGHHWIARRVPDDAYVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQY
NTPRVWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSEGTPVSKKVFRPIGINRTSQTA
ILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIPDYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNYL
EETMAKGHAMLHAVEAQLLAGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD

Specific function: Unknown

COG id: COG4690

COG function: function code E; Dipeptidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C69 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005322 [H]

Pfam domain/function: PF03577 Peptidase_C69 [H]

EC number: NA

Molecular weight: Translated: 52906; Mature: 52774

Theoretical pI: Translated: 4.65; Mature: 4.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLP
CCCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
DNPMTYTSVPDALGKDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMV
CCCEEECCCCHHHCCCCCEECCCCCCCCEEEECCCEEECCCEEECCCCHHHCCCCCCHHH
TLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIWWLETIGGHHWIARRVPDDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCC
YVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
EEECCCCCCCCCEECCCCHHHEECCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCC
YNTPRVWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSE
CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHCHHHEECHHHHHHHHHCCCCCCCCCCCCCC
GTPVSKKVFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIP
CCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHH
DYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLHAVEAQLL
HHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure 
ACTTILVGKKASYDGSTMVARTEDSQNGDFTPKKMIVVKPEDQPRHYRSVQSSFEMDLP
CCEEEEECCCCCCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCC
DNPMTYTSVPDALGKDGIWAEAGVNEANVAMSATETITTNSRVLGADPLVASGIGEEDMV
CCCEEECCCCHHHCCCCCEECCCCCCCCEEEECCCEEECCCEEECCCCHHHCCCCCCHHH
TLVLPYIRSAREGVLRLGAILEDYGTYESNGVAFSDEHDIWWLETIGGHHWIARRVPDDA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCEEEEEECCCCEEEEECCCCCC
YVTNPNQFGIDHFEFNNPEDYLCSADLKDFIDTYHLDLTYSHEHFNPRYAFGSQRDKDRQ
EEECCCCCCCCCEECCCCHHHEECCHHHHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCC
YNTPRVWIMQKFLNPEIVQDPRSFALAWCQKPYRKITVEDVKYVLSSHYQDTVYDPYGSE
CCCCHHHHHHHHCCCHHHCCHHHHHHHHHHCHHHEECHHHHHHHHHCCCCCCCCCCCCCC
GTPVSKKVFRPIGINRTSQTAILHIRPNKPQEIAAIQWMAYGSMPFNTMVPFFTQVKTIP
CCCCHHHHHCCCCCCCCCCEEEEEECCCCCCHHEEEEEEEECCCCHHHHHHHHHHHHHHH
DYFANTYENVSTDNFYWTNRLIAALADPHYNHHETDLDNYLEETMAKGHAMLHAVEAQLL
HHHHHHHCCCCCCCEEHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
AGETVDLEEENQKMSDYVQGETQTLLNKILFDASNLMTNRFSLSD
CCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]