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The map label for this gene is yhbA [H]

Identifier: 21909989

GI number: 21909989

Start: 496937

End: 498061

Strand: Direct

Name: yhbA [H]

Synonym: SpyM3_0453

Alternate gene names: 21909989

Gene position: 496937-498061 (Clockwise)

Preceding gene: 21909988

Following gene: 21909990

Centisome position: 26.15

GC content: 36.89

Gene sequence:

>1125_bases
ATGACTATTAAGGCAGAAATTAAGGCACTCGCCAAAGAAATTGGTATCTCTAAAATTGGTTTTACGACGGCAGATAACTT
TGATTATTTGGAAAAGTCATTGCGTGCTTCTGTGGAAGAGGGGCGCAATTCAGGATTTGAACATAAAGTCATAGAGGATC
GTATCTCCCCTGAAAGGCTTTTAGAATCGGCTAAAACGATTATTTCAATTGGCGTTGCTTATCCTCACAAACTTCCTCAG
CAACCTCAAAAAACACCTTATAAACGTGGAAAAATTACACCTAGTTCGTGGGGGCTTGATTATCATTATGTGGTCGGCGA
AAAGTTAGACAGACTATCAAAAGGCATTGAAGAGCTGTGTCGAGATTTTCCTTTGCAACAAAAAGCAATGGTCGATACTG
GAGCTTTAGTTGATACTGCAGTTGCCCAAAGAGCGGGTATTGGTTTTATAGGAAAAAATGGTTTAGTTATTTCTAAAGAA
TATGGCTCTTATATGTTTTTGGGAGAATTAATTACCAATTTAGAGATCGAGCCAGACAAGCCTGTCGATTATGATTGTGG
TGACTGTCGTCGTTGTCTAGATGCCTGTCCAACTTCTTGTTTAATTGGTGATGGCTCAATGAATGCCAAGCGTTGTCTAT
CATTTCAAACCCAAGATAAGGGAATGATGGACATAGAGTTTCGAAAAAAGATTAAAACAGTTATCTATGGTTGTGATATT
TGCCAAATTTGCTGTCCTTATAACAAGGGTATAAACAATTCACCAGCTACAGAGATTGATCCTGAGTTGGCTCAACCAGA
ATTAATACCATTTTTGAGTTTATCAAATGGACAATTTAAAGAAAAATTTGGTATGATTGCTGGAAGTTGGCGAGGTAAAA
ATATTTTACAGCGTAATGCCATTATTGCGCTAGCAAATGCTCATGATAAAACCGCAGTGGTCAAATTAATAGAGATTATT
GATAAAAATAATAACCCTATTCATACTGCAACAGCTATATGGGCATTGGGAGAAATTGTCAAAAAACCAAACGATGAGAT
ACTGGCGTTTATGAGTCATTTAACCTTAAAAGATGAAGATAGCCAAAAAGAGTTGGAATTAATCCGTCATAAATGGCAAG
TTTAA

Upstream 100 bases:

>100_bases
GAGAAAACCCAGATAAATCAGGAAGTAAAATGGTTATGTTTGATTAGAATTGTCCTTCTTTTTCCTTGAAGTCTTAACTT
ATTTTGATTATGATAGTAGT

Downstream 100 bases:

>100_bases
GCCTTTTATGGTATTTTTAAGAACCTTATGATAAAATAAAACAGATTAACAAAGATTGGAGAAATCTCATGGAAGTGGCT
GAAATTCGCCAAAAAATAGT

Product: iron-sulfur cluster-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 374; Mature: 373

Protein sequence:

>374_residues
MTIKAEIKALAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRISPERLLESAKTIISIGVAYPHKLPQ
QPQKTPYKRGKITPSSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKE
YGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDI
CQICCPYNKGINNSPATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEII
DKNNNPIHTATAIWALGEIVKKPNDEILAFMSHLTLKDEDSQKELELIRHKWQV

Sequences:

>Translated_374_residues
MTIKAEIKALAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRISPERLLESAKTIISIGVAYPHKLPQ
QPQKTPYKRGKITPSSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKE
YGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDI
CQICCPYNKGINNSPATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEII
DKNNNPIHTATAIWALGEIVKKPNDEILAFMSHLTLKDEDSQKELELIRHKWQV
>Mature_373_residues
TIKAEIKALAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRISPERLLESAKTIISIGVAYPHKLPQQ
PQKTPYKRGKITPSSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEY
GSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDIC
QICCPYNKGINNSPATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIALANAHDKTAVVKLIEIID
KNNNPIHTATAIWALGEIVKKPNDEILAFMSHLTLKDEDSQKELELIRHKWQV

Specific function: Unknown

COG id: COG1600

COG function: function code C; Uncharacterized Fe-S protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HEAT-like PBS-type repeats [H]

Homologues:

Organism=Escherichia coli, GI1790608, Length=354, Percent_Identity=28.2485875706215, Blast_Score=151, Evalue=6e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004453
- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR011989
- InterPro:   IPR016024
- InterPro:   IPR013542
- InterPro:   IPR009051
- InterPro:   IPR004155 [H]

Pfam domain/function: PF08331 DUF1730; PF03130 HEAT_PBS [H]

EC number: NA

Molecular weight: Translated: 41754; Mature: 41622

Theoretical pI: Translated: 7.09; Mature: 7.09

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.9 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
2.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTIKAEIKALAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRISPERL
CCCHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
LESAKTIISIGVAYPHKLPQQPQKTPYKRGKITPSSWGLDYHYVVGEKLDRLSKGIEELC
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH
RDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDK
HHCCCCHHHHHHCCHHHHHHHHHHCCCCEECCCCEEEEECCCCCHHHHHHHHCCCCCCCC
PVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDI
CCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCH
CQICCPYNKGINNSPATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHCCCCCCHHHHCCC
IIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILAFMSHLTLKDED
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
SQKELELIRHKWQV
CHHHHHHHHHHCCC
>Mature Secondary Structure 
TIKAEIKALAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRISPERL
CCHHHHHHHHHHHCCHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCHHHH
LESAKTIISIGVAYPHKLPQQPQKTPYKRGKITPSSWGLDYHYVVGEKLDRLSKGIEELC
HHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHH
RDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDK
HHCCCCHHHHHHCCHHHHHHHHHHCCCCEECCCCEEEEECCCCCHHHHHHHHCCCCCCCC
PVDYDCGDCRRCLDACPTSCLIGDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIYGCDI
CCCCCCHHHHHHHHHCCCEEEECCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCH
CQICCPYNKGINNSPATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNA
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCHHHHHCCHHCCCCCCHHHHCCC
IIALANAHDKTAVVKLIEIIDKNNNPIHTATAIWALGEIVKKPNDEILAFMSHLTLKDED
EEEEECCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC
SQKELELIRHKWQV
CHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: Fe [C]

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]