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The map label for this gene is glr [H]

Identifier: 21909798

GI number: 21909798

Start: 303002

End: 303796

Strand: Direct

Name: glr [H]

Synonym: SpyM3_0262

Alternate gene names: 21909798

Gene position: 303002-303796 (Clockwise)

Preceding gene: 21909797

Following gene: 21909799

Centisome position: 15.94

GC content: 40.25

Gene sequence:

>795_bases
ATGGATACAAGACCAATTGGGTTTTTAGATTCTGGTGTGGGAGGTCTGACCGTCGTTTGTGAATTGATTCGTCAGCTCCC
TCATGAGAAGATTGTATATATTGGTGATTCAGCAAGAGCCCCCTATGGTCCTAGACCCAAAAAACAAATTAAGGAGTATA
CTTGGGAGCTAGTCAATTTTTTGCTGACTCAAAATGTTAAAATGATTGTTTTTGCATGCAATACCGCAACAGCGGTGGCT
TGGGAAGAAGTAAAAGCAGCTTTAGATATTCCTGTTTTAGGGGTTGTCTTACCGGGGGCAAGCGCAGCTATTAAATCAAC
GACAAAAGGCCAGGTTGGGGTCATCGGAACCCCAATGACAGTGGCTTCAGACATTTATCGCAAAAAAATCCAGCTATTAG
CACCATCTGTTCAAGTAAGGAGTCTTGCTTGCCCGAAGTTTGTACCGATTGTGGAATCAAATGAGATGTGTTCGAGTATA
GCTAAAAAAATAGTTTATGACAGTCTAGCACCATTAGTCGGTAAAATAGATACCCTTGTACTAGGATGTACTCACTATCC
CTTGTTACGACCAATTATCCAAAATGTTATGGGGCCATCTGTTAAGCTGATTGACAGTGGAGCAGAATGCGTCCGAGATA
TCTCTGTCTTATTAAACTATTTTGACATTAACGGTAATTATCATCAAAAAGCTGTCAAACACCGCTTTTTTACAACAGCA
AATCCTGAGATTTTTCAAGAAATTGCCTCGATTTGGCTGAAACAAAAAATAAATGTGGAGCATGTCACCTTATGA

Upstream 100 bases:

>100_bases
TCTTATCAGTTAGATTTGTCAACTGTTCAGGGTTTAAAAAGAAACTCAGTTGGCTATTTCCAACTGAGTTTTTCATATCG
TCAGTAAGGAAGTAAAGATA

Downstream 100 bases:

>100_bases
GTGAAAAAATTTACGAATACAAAGATGAAAATAACTGGTTTATCGGAAAGATGACTGGTCATAATTTAATATCGGGCTGG
GGAGTCAAACACACGACAAT

Product: glutamate racemase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVA
WEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESNEMCSSI
AKKIVYDSLAPLVGKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFFTTA
NPEIFQEIASIWLKQKINVEHVTL

Sequences:

>Translated_264_residues
MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVA
WEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESNEMCSSI
AKKIVYDSLAPLVGKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFFTTA
NPEIFQEIASIWLKQKINVEHVTL
>Mature_264_residues
MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNFLLTQNVKMIVFACNTATAVA
WEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMTVASDIYRKKIQLLAPSVQVRSLACPKFVPIVESNEMCSSI
AKKIVYDSLAPLVGKIDTLVLGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFFTTA
NPEIFQEIASIWLKQKINVEHVTL

Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]

COG id: COG0796

COG function: function code M; Glutamate racemase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the aspartate/glutamate racemases family [H]

Homologues:

Organism=Escherichia coli, GI87082355, Length=216, Percent_Identity=31.9444444444444, Blast_Score=92, Evalue=3e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015942
- InterPro:   IPR001920
- InterPro:   IPR018187
- InterPro:   IPR004391 [H]

Pfam domain/function: PF01177 Asp_Glu_race [H]

EC number: =5.1.1.3 [H]

Molecular weight: Translated: 29001; Mature: 29001

Theoretical pI: Translated: 8.97; Mature: 8.97

Prosite motif: PS00924 ASP_GLU_RACEMASE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT
HHHCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCEEEECCCHH
VASDIYRKKIQLLAPSVQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDTLV
HHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFFTTA
CCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NPEIFQEIASIWLKQKINVEHVTL
CHHHHHHHHHHHHHHCCCEEEECC
>Mature Secondary Structure
MDTRPIGFLDSGVGGLTVVCELIRQLPHEKIVYIGDSARAPYGPRPKKQIKEYTWELVNF
CCCCCCCCCCCCCCHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHHHHH
LLTQNVKMIVFACNTATAVAWEEVKAALDIPVLGVVLPGASAAIKSTTKGQVGVIGTPMT
HHHCCCEEEEEEECCHHHHHHHHHHHHHCCCEEEEEECCCCHHHHCCCCCCEEEECCCHH
VASDIYRKKIQLLAPSVQVRSLACPKFVPIVESNEMCSSIAKKIVYDSLAPLVGKIDTLV
HHHHHHHHHHHHHCCCHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGCTHYPLLRPIIQNVMGPSVKLIDSGAECVRDISVLLNYFDINGNYHQKAVKHRFFTTA
CCCCCHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCC
NPEIFQEIASIWLKQKINVEHVTL
CHHHHHHHHHHHHHHCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]