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The map label for this gene is csrS [H]

Identifier: 21909781

GI number: 21909781

Start: 284323

End: 285825

Strand: Direct

Name: csrS [H]

Synonym: SpyM3_0245

Alternate gene names: 21909781

Gene position: 284323-285825 (Clockwise)

Preceding gene: 21909780

Following gene: 21909782

Centisome position: 14.96

GC content: 35.53

Gene sequence:

>1503_bases
ATGGAAAATCAGAAACAAAAACAGAAGAAATATAAAAATTCGTTACCAAAACGACTATCTAATATCTTTTTTGTTCTTTT
TTTCTGCATTTTCTCTGCCTTTACACTGATTGCCTATAGTTCAACAAACTATTTCTTATTGAAGAAAGAAAAGCAGTCAG
TCTTTCAAGCTGTAAATATTGTTAGAGTTCGTCTTTCTGAGGTGGACTCTAATTTTACATTAGAGAACTTAGCAGAAGTT
TTGTACAAAAACGATAAAACACATCTGAGAATTGATGACAGAAAGGGCAGTCGAGTCATTAGGAGTGAGCGCGATATCAC
AAATACTCTAGATGCGAATCAAGATATTTATGTCTATAACATTGATAAACAGATGATTTTTACCACAGATAACGAAGAAT
CATCTCCTGGCTTGCATGGTCCTATCGGTCGGGTGTATCACGACCATATCGAAGATCAGTATCGTGGGTTTTCCATGACA
CAAAAGGTATATTCTAATCGGACTGGAAAATTTGTGGGCTATGTTCAAGTCTTTCATGATTTAGGCAATTATTATGTCAT
TAGAGCAAGACTGCTGTTTTGGCTACTAGTTGTTGAGTTATTTGGCACAAGCTTAGCCTATTTAATCATCTTAATTACTA
CGCGGCGCTTTTTGAAGCCTTTACACAATTTACATGAAGTGATGCGTAATATCTCTGAAAATCCTAATAATTTAAACCTG
CGCTCAGATATTTCGTCAGGAGATGAAATCGAAGAATTGTCTGTTATCTTTGACAATATGTTAGACAAATTGGAGACACA
TACTAAGTTGCAATCACGTTTTATTAGTGATGTCAGCCATGAATTACGAACACCGGTTGCGATTATTAAAGGGCATATTG
GTCTCTTACAACGTTGGGGTAAAGATGACAGTGATATTCTTGAAGAAAGCTTGACAGCAACAGCGCATGAGGCTGACCGT
ATGGCAATCATGATTAATGATATGTTAGACATGATTCGCGTACAAGGCTCATTTGAGGGACATCAAAATGATATGACAGT
TTTGGAAGATTCTATTGAAACTGTTGTTGGTAATTTTAGAGTTTTAAGAGAAGATTTTATCTTTACATGGCAGTCAGAAA
ATCCAAAAACGATAGCCCGTATTTATAAAAATCATTTTGAGCAGGCTTTGATGATTCTTATTGACAATGCTGTGAAGTAT
TCCCGTAAAGAAAAGAAAATCGCGATTAACCTTTCAGTGACTGGCAAACAAGAAGCTATTGTTAGAGTTCAAGATAAAGG
CGAAGGAATTTCTAAAGAAGATATTGAACATATCTTTGAACGCTTTTATAGAACGGATAAATCACGTAATCGAACAAGTA
CCCAGGCTGTATTAGGGATTGGCTTGTCTATTCTCAAGCAAATTGTAGATGGGTATCATTTACAGATGAAGGTTGAAAGT
GAATTAAATGAAGGTTCAGTGTTTATCTTACATATTCCTTTGGCCCAGTCTAAAGAGAGTTAG

Upstream 100 bases:

>100_bases
ATATTCGTTATCTCCGCGGCAAAATTGACATTCCAGGCAAGGAATCTTATATCCAAACAGTGCGTGGCATGGGATACGTT
ATTCGTGAGAAATAAGTCAT

Downstream 100 bases:

>100_bases
AGTAGCTTAAGGCATTGTTAATGTGACAGGTATAGTATGTAATCATTAGATAATAGTAGCAGTCTTTTGCCACAACTGGT
TAGAAGCTGATGCTATTTTT

Product: two-component sensory transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 500; Mature: 500

Protein sequence:

>500_residues
MENQKQKQKKYKNSLPKRLSNIFFVLFFCIFSAFTLIAYSSTNYFLLKKEKQSVFQAVNIVRVRLSEVDSNFTLENLAEV
LYKNDKTHLRIDDRKGSRVIRSERDITNTLDANQDIYVYNIDKQMIFTTDNEESSPGLHGPIGRVYHDHIEDQYRGFSMT
QKVYSNRTGKFVGYVQVFHDLGNYYVIRARLLFWLLVVELFGTSLAYLIILITTRRFLKPLHNLHEVMRNISENPNNLNL
RSDISSGDEIEELSVIFDNMLDKLETHTKLQSRFISDVSHELRTPVAIIKGHIGLLQRWGKDDSDILEESLTATAHEADR
MAIMINDMLDMIRVQGSFEGHQNDMTVLEDSIETVVGNFRVLREDFIFTWQSENPKTIARIYKNHFEQALMILIDNAVKY
SRKEKKIAINLSVTGKQEAIVRVQDKGEGISKEDIEHIFERFYRTDKSRNRTSTQAVLGIGLSILKQIVDGYHLQMKVES
ELNEGSVFILHIPLAQSKES

Sequences:

>Translated_500_residues
MENQKQKQKKYKNSLPKRLSNIFFVLFFCIFSAFTLIAYSSTNYFLLKKEKQSVFQAVNIVRVRLSEVDSNFTLENLAEV
LYKNDKTHLRIDDRKGSRVIRSERDITNTLDANQDIYVYNIDKQMIFTTDNEESSPGLHGPIGRVYHDHIEDQYRGFSMT
QKVYSNRTGKFVGYVQVFHDLGNYYVIRARLLFWLLVVELFGTSLAYLIILITTRRFLKPLHNLHEVMRNISENPNNLNL
RSDISSGDEIEELSVIFDNMLDKLETHTKLQSRFISDVSHELRTPVAIIKGHIGLLQRWGKDDSDILEESLTATAHEADR
MAIMINDMLDMIRVQGSFEGHQNDMTVLEDSIETVVGNFRVLREDFIFTWQSENPKTIARIYKNHFEQALMILIDNAVKY
SRKEKKIAINLSVTGKQEAIVRVQDKGEGISKEDIEHIFERFYRTDKSRNRTSTQAVLGIGLSILKQIVDGYHLQMKVES
ELNEGSVFILHIPLAQSKES
>Mature_500_residues
MENQKQKQKKYKNSLPKRLSNIFFVLFFCIFSAFTLIAYSSTNYFLLKKEKQSVFQAVNIVRVRLSEVDSNFTLENLAEV
LYKNDKTHLRIDDRKGSRVIRSERDITNTLDANQDIYVYNIDKQMIFTTDNEESSPGLHGPIGRVYHDHIEDQYRGFSMT
QKVYSNRTGKFVGYVQVFHDLGNYYVIRARLLFWLLVVELFGTSLAYLIILITTRRFLKPLHNLHEVMRNISENPNNLNL
RSDISSGDEIEELSVIFDNMLDKLETHTKLQSRFISDVSHELRTPVAIIKGHIGLLQRWGKDDSDILEESLTATAHEADR
MAIMINDMLDMIRVQGSFEGHQNDMTVLEDSIETVVGNFRVLREDFIFTWQSENPKTIARIYKNHFEQALMILIDNAVKY
SRKEKKIAINLSVTGKQEAIVRVQDKGEGISKEDIEHIFERFYRTDKSRNRTSTQAVLGIGLSILKQIVDGYHLQMKVES
ELNEGSVFILHIPLAQSKES

Specific function: Member of the two-component regulatory system ArlS/ArlR involved in the regulation of adhesion, autolysis, multidrug resistance and virulence. ArlS probably functions as a sensor protein kinase which is autophosphorylated at a histidine residue and transf

COG id: COG0642

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1786783, Length=323, Percent_Identity=26.625386996904, Blast_Score=102, Evalue=6e-23,
Organism=Escherichia coli, GI1790346, Length=285, Percent_Identity=29.8245614035088, Blast_Score=96, Evalue=7e-21,
Organism=Escherichia coli, GI1788393, Length=283, Percent_Identity=24.0282685512367, Blast_Score=89, Evalue=9e-19,
Organism=Escherichia coli, GI1786600, Length=221, Percent_Identity=25.3393665158371, Blast_Score=82, Evalue=9e-17,
Organism=Escherichia coli, GI1788713, Length=238, Percent_Identity=24.3697478991597, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI1787894, Length=356, Percent_Identity=23.0337078651685, Blast_Score=76, Evalue=4e-15,
Organism=Escherichia coli, GI1786912, Length=274, Percent_Identity=25.5474452554745, Blast_Score=75, Evalue=1e-14,
Organism=Escherichia coli, GI1790551, Length=288, Percent_Identity=26.7361111111111, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI145693157, Length=261, Percent_Identity=26.4367816091954, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1789808, Length=310, Percent_Identity=23.5483870967742, Blast_Score=67, Evalue=3e-12,
Organism=Escherichia coli, GI1789403, Length=331, Percent_Identity=25.6797583081571, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788549, Length=249, Percent_Identity=23.6947791164659, Blast_Score=62, Evalue=8e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 57964; Mature: 57964

Theoretical pI: Translated: 7.13; Mature: 7.13

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MENQKQKQKKYKNSLPKRLSNIFFVLFFCIFSAFTLIAYSSTNYFLLKKEKQSVFQAVNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VRVRLSEVDSNFTLENLAEVLYKNDKTHLRIDDRKGSRVIRSERDITNTLDANQDIYVYN
HHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHCCCCCCEEEEE
IDKQMIFTTDNEESSPGLHGPIGRVYHDHIEDQYRGFSMTQKVYSNRTGKFVGYVQVFHD
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH
LGNYYVIRARLLFWLLVVELFGTSLAYLIILITTRRFLKPLHNLHEVMRNISENPNNLNL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
RSDISSGDEIEELSVIFDNMLDKLETHTKLQSRFISDVSHELRTPVAIIKGHIGLLQRWG
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
KDDSDILEESLTATAHEADRMAIMINDMLDMIRVQGSFEGHQNDMTVLEDSIETVVGNFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VLREDFIFTWQSENPKTIARIYKNHFEQALMILIDNAVKYSRKEKKIAINLSVTGKQEAI
HEEHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEE
VRVQDKGEGISKEDIEHIFERFYRTDKSRNRTSTQAVLGIGLSILKQIVDGYHLQMKVES
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
ELNEGSVFILHIPLAQSKES
CCCCCCEEEEEECCCCCCCC
>Mature Secondary Structure
MENQKQKQKKYKNSLPKRLSNIFFVLFFCIFSAFTLIAYSSTNYFLLKKEKQSVFQAVNI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEHHHHHHHHHHHH
VRVRLSEVDSNFTLENLAEVLYKNDKTHLRIDDRKGSRVIRSERDITNTLDANQDIYVYN
HHHHHHHCCCCCCHHHHHHHHHCCCCCEEEEECCCCCHHHHCCHHHHHHCCCCCCEEEEE
IDKQMIFTTDNEESSPGLHGPIGRVYHDHIEDQYRGFSMTQKVYSNRTGKFVGYVQVFHD
CCCEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHH
LGNYYVIRARLLFWLLVVELFGTSLAYLIILITTRRFLKPLHNLHEVMRNISENPNNLNL
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCE
RSDISSGDEIEELSVIFDNMLDKLETHTKLQSRFISDVSHELRTPVAIIKGHIGLLQRWG
ECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHC
KDDSDILEESLTATAHEADRMAIMINDMLDMIRVQGSFEGHQNDMTVLEDSIETVVGNFR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHH
VLREDFIFTWQSENPKTIARIYKNHFEQALMILIDNAVKYSRKEKKIAINLSVTGKQEAI
HEEHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCEE
VRVQDKGEGISKEDIEHIFERFYRTDKSRNRTSTQAVLGIGLSILKQIVDGYHLQMKVES
EEEECCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCEEEEEEEEC
ELNEGSVFILHIPLAQSKES
CCCCCCEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA