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The map label for this gene is rpe [H]

Identifier: 21909728

GI number: 21909728

Start: 220161

End: 220823

Strand: Direct

Name: rpe [H]

Synonym: SpyM3_0192

Alternate gene names: 21909728

Gene position: 220161-220823 (Clockwise)

Preceding gene: 161485754

Following gene: 21909729

Centisome position: 11.58

GC content: 43.89

Gene sequence:

>663_bases
ATGTCAACTCTAAAAATTGCCCCATCTATTCTAGCAGCTGATTACGCTAATTTTGCTTCTGAGCTAGCTCGTATTGAAGA
AACAGATGCCGAATACGTTCACATTGACATTATGGATGGTCAATTTGTTCCTAACATCAGTTTTGGTGCAGATGTTGTGG
CAAGTATGAGAAAGCACAGTAAATTGGTCTTTGATTGCCATCTAATGGTGGTTGATCCTGAACGCTATGTTGAGGCTTTT
GCACAAGCTGGTGCTGATATCATGACCATTCACACAGAAAGTACTCGTCATATTCATGGAGCCCTTCAAAAAATCAAGGC
AGCTGGTATGAAAGCAGGGGTAGTGATTAATCCAGGAACTCCTGCAACAGCCCTAGAACCTTTGCTAGACTTAGTTGACC
AAGTCCTCATTATGACAGTCAACCCAGGTTTTGGGGGTCAGGCCTTTATCCCAGAATGTTTAGAAAAAGTGGCTACCGTA
GCCAAATGGCGAGATGAAAAAGGATTGTCCTTTGACATTGAGGTTGATGGCGGAGTAGACAATAAGACCATTCGTGCTTG
TTATGAAGCAGGGGCCAATGTCTTTGTGGCAGGTTCTTACCTTTTCAAGGCCAGTGACCTAGTGAGCCAAGTGCAGACTC
TAAGGACGGCCCTACATGACTAA

Upstream 100 bases:

>100_bases
GTGGCCAGTTCGTTATGAGCATTACCTGCAATTTCTCAGTGAAATTGAAAACCGTCGTGAAACATATAAAAAAGTTATCA
AAAGAAAGTAGGTCTACTCC

Downstream 100 bases:

>100_bases
AGTAGCCCTCTTTTCTGGGGGAGATCTTTCTTATTTCACCCGTGAGTTTGATTATTTTGTCGGTATTGATAGTGGGAGCC
TGTTTTTATTGGAAAATGGG

Product: ribulose-phosphate 3-epimerase

Products: NA

Alternate protein names: Pentose-5-phosphate 3-epimerase; PPE; R5P3E [H]

Number of amino acids: Translated: 220; Mature: 219

Protein sequence:

>220_residues
MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAF
AQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATV
AKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTALHD

Sequences:

>Translated_220_residues
MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAF
AQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATV
AKWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTALHD
>Mature_219_residues
STLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHSKLVFDCHLMVVDPERYVEAFA
QAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGTPATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVA
KWRDEKGLSFDIEVDGGVDNKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTALHD

Specific function: Unknown

COG id: COG0036

COG function: function code G; Pentose-5-phosphate-3-epimerase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribulose-phosphate 3-epimerase family [H]

Homologues:

Organism=Homo sapiens, GI40385883, Length=217, Percent_Identity=44.2396313364055, Blast_Score=187, Evalue=5e-48,
Organism=Homo sapiens, GI219879828, Length=217, Percent_Identity=41.9354838709677, Blast_Score=174, Evalue=4e-44,
Organism=Homo sapiens, GI24307923, Length=168, Percent_Identity=37.5, Blast_Score=113, Evalue=1e-25,
Organism=Escherichia coli, GI1789788, Length=219, Percent_Identity=43.37899543379, Blast_Score=183, Evalue=6e-48,
Organism=Escherichia coli, GI1790523, Length=219, Percent_Identity=39.2694063926941, Blast_Score=174, Evalue=5e-45,
Organism=Escherichia coli, GI1790754, Length=212, Percent_Identity=30.188679245283, Blast_Score=101, Evalue=3e-23,
Organism=Caenorhabditis elegans, GI17552948, Length=218, Percent_Identity=40.8256880733945, Blast_Score=164, Evalue=4e-41,
Organism=Saccharomyces cerevisiae, GI6322341, Length=214, Percent_Identity=42.5233644859813, Blast_Score=170, Evalue=2e-43,
Organism=Drosophila melanogaster, GI24586301, Length=216, Percent_Identity=43.9814814814815, Blast_Score=193, Evalue=8e-50,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR000056
- InterPro:   IPR011060 [H]

Pfam domain/function: PF00834 Ribul_P_3_epim [H]

EC number: =5.1.3.1 [H]

Molecular weight: Translated: 23781; Mature: 23650

Theoretical pI: Translated: 4.78; Mature: 4.78

Prosite motif: PS01085 RIBUL_P_3_EPIMER_1 ; PS01086 RIBUL_P_3_EPIMER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC
KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT
CEEEEEEEEEECHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCC
PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD
CHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTALHD
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
STLKIAPSILAADYANFASELARIEETDAEYVHIDIMDGQFVPNISFGADVVASMRKHS
CCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCC
KLVFDCHLMVVDPERYVEAFAQAGADIMTIHTESTRHIHGALQKIKAAGMKAGVVINPGT
CEEEEEEEEEECHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCCEEECCCC
PATALEPLLDLVDQVLIMTVNPGFGGQAFIPECLEKVATVAKWRDEKGLSFDIEVDGGVD
CHHHHHHHHHHHHHHEEEEECCCCCCCCHHHHHHHHHHHHHHHCCCCCCEEEEEECCCCC
NKTIRACYEAGANVFVAGSYLFKASDLVSQVQTLRTALHD
HHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA