Click here to switch to the map view.

The map label for this gene is yurN [H]

Identifier: 21909718

GI number: 21909718

Start: 210875

End: 211741

Strand: Direct

Name: yurN [H]

Synonym: SpyM3_0182

Alternate gene names: 21909718

Gene position: 210875-211741 (Clockwise)

Preceding gene: 21909717

Following gene: 21909719

Centisome position: 11.1

GC content: 39.1

Gene sequence:

>867_bases
ATGAGAGAGACGCTCATCTCATACGCTTTCTTAGCTCCGGTCTTGGTTTTCTTTGTGATTTTTGTCTTGATACCGATGAT
TATGGGCTTTGTGACGAGTTTTTTCAATTATTCCATGACGGATTTTACCTTTGTTGGTTTTGCTAATTATGCTAGGATGT
TTCAAGATCCCATTTTCATGAAGTCTCTTATGAACACCTTGATTATTGTTATTGGTTCGGTACCTGTTGTAGTTTTCTTT
TCCCTCTTTGTGGCGGCTAAAACCTACGACAAAAATGTAGTGGCGCGTTCGTTTTACCGGGCAGTTTTCTTTCTGCCTGT
TGTTACCGGAAGTGTTGCGGTGACGGTGGTTTGGAAATGGATCTATGATCCGATGTCAGGGATTTTGAATTATGTCTTAA
AATATGCTCATGTGATTGAACAAAACATTAGTTGGCTGGGAGATAAGCACTGGGCTTTGTTAGCTATTATTGCTATTTTA
TTAACCACATCTGTTGGGCAGCCTATTATTCTATATATTGCTGCTATGGGAAATATTGATAATTCTTTGATGGAAGCTGC
GCGTGTAGACGGCGCCACAGAATTTCAGGTGTTTTGGAATATCAAGTGGCCAAGTCTCCTGCCAACAACCTTATATATTG
CTGTCATAACAACCATTAATTCCTTCCAATGTTTTGCTTTGATTCAACTTTTGACGTCTGGAGGGCCAAATTATTCAACC
AGTACCCTCATGTACTATTTGTATGAAAAGGCCTTTAAGCTCTCTGAATACGGCTATGCCAACACAATGGGTGTATTCTT
GGCAGTCATGATTGCAATCATCAGCTTTGCTCAATTTAAAATTTTAGGTAATGATGTGGAATATTAG

Upstream 100 bases:

>100_bases
TCACGGCACATGTCAAATGGTCACTGGAAAGGAGCCTTTCCTTTTTTAGGAGAGATTAATAGAAAAAGAGGTATTTCAAG
TGAACGTCAATAAATTAAAA

Downstream 100 bases:

>100_bases
GAGGATATTAAGATGAAGAAAAAGAAACTAACCGCATCGGATGTTCTGACTACTGTTATTCTATGCATCTTGACCATTTT
GTTTATTTTCCCATTTTATT

Product: N-acetylneuraminate transport system permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MRETLISYAFLAPVLVFFVIFVLIPMIMGFVTSFFNYSMTDFTFVGFANYARMFQDPIFMKSLMNTLIIVIGSVPVVVFF
SLFVAAKTYDKNVVARSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGILNYVLKYAHVIEQNISWLGDKHWALLAIIAIL
LTTSVGQPIILYIAAMGNIDNSLMEAARVDGATEFQVFWNIKWPSLLPTTLYIAVITTINSFQCFALIQLLTSGGPNYST
STLMYYLYEKAFKLSEYGYANTMGVFLAVMIAIISFAQFKILGNDVEY

Sequences:

>Translated_288_residues
MRETLISYAFLAPVLVFFVIFVLIPMIMGFVTSFFNYSMTDFTFVGFANYARMFQDPIFMKSLMNTLIIVIGSVPVVVFF
SLFVAAKTYDKNVVARSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGILNYVLKYAHVIEQNISWLGDKHWALLAIIAIL
LTTSVGQPIILYIAAMGNIDNSLMEAARVDGATEFQVFWNIKWPSLLPTTLYIAVITTINSFQCFALIQLLTSGGPNYST
STLMYYLYEKAFKLSEYGYANTMGVFLAVMIAIISFAQFKILGNDVEY
>Mature_288_residues
MRETLISYAFLAPVLVFFVIFVLIPMIMGFVTSFFNYSMTDFTFVGFANYARMFQDPIFMKSLMNTLIIVIGSVPVVVFF
SLFVAAKTYDKNVVARSFYRAVFFLPVVTGSVAVTVVWKWIYDPMSGILNYVLKYAHVIEQNISWLGDKHWALLAIIAIL
LTTSVGQPIILYIAAMGNIDNSLMEAARVDGATEFQVFWNIKWPSLLPTTLYIAVITTINSFQCFALIQLLTSGGPNYST
STLMYYLYEKAFKLSEYGYANTMGVFLAVMIAIISFAQFKILGNDVEY

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=255, Percent_Identity=28.2352941176471, Blast_Score=92, Evalue=3e-20,
Organism=Escherichia coli, GI1789861, Length=296, Percent_Identity=24.3243243243243, Blast_Score=90, Evalue=2e-19,
Organism=Escherichia coli, GI1790465, Length=246, Percent_Identity=26.8292682926829, Blast_Score=62, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32520; Mature: 32520

Theoretical pI: Translated: 7.47; Mature: 7.47

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
4.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCC
>Mature Secondary Structure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HHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]