Click here to switch to the map view.

The map label for this gene is 21909561

Identifier: 21909561

GI number: 21909561

Start: 45848

End: 46972

Strand: Reverse

Name: 21909561

Synonym: SpyM3_0025

Alternate gene names: NA

Gene position: 46972-45848 (Counterclockwise)

Preceding gene: 21909608

Following gene: NA

Centisome position: 2.47

GC content: 39.29

Gene sequence:

>1125_bases
ATGAAAAAATTTCATCGTTTTTTGGTCTCAGGAGTAATCCTTTTAGGTTTTAATGGTCTAGTACCTACTATGCCATCTAC
ACTTATTTCGCAACAGGAAAATCTTGTTCATGCAGCTGTTTTAGGCGATAACTATCCGAGTAAGTGGAAAAAAGGCAATG
GAATTGATTCGTGGAACATGTATATCCGCCAATGCACTTCTTTTGCAGCTTTTCGTTTAAGCTCTGCTAATGGTTTTCAG
TTACCTAAAGGCTACGGTAATGCCTGCACGTGGGGACATATCGCGAAAAATCAGGGTTATCCTGTGAATAAGACACCAAG
CATAGGGGCTATCGCTTGGTTTGATAAAAACGCTTATCAGTCAAATGCTGCTTACGGTCATGTAGCATGGGTAGCTGATA
TCCGTGGAGACACTGTCACTATCGAAGAGTATAATTACAACGCTGGACAAGGCCCTGAAAGATACCATAAGCGTCAAATT
CCAAAATCTCAGGTAAGTGGTTATATCCATTTTAAAGACTTATCATCTCAGACAAGTCATTCCTACCCAAGACAACTAAA
ACACATTTCTCAATCTTCATTTGACCCCTCTGGAACTTATCACTTTACAACCAGATTACCAGTCAAAGGACAAACCAGTA
TCGATAGCCCTGATCTTGCTTACTATGAAGCAGGTCAATCTGTTTATTACGATAAAATCGTGACTGCTGGAGGTTATACA
TGGCTTAGCTACCTCAGTTTTTCTGGAAACCGACGCTATATTCCCATTAAAGAGCCAGCACAGTCTGTGGTTCAAAATGA
CAATACAAAACCTTCCATTAAGGTCGGTGATACTGTTACCTTCCCTGGCGTTTTTCGTGTAGATCAGCTTGTTAATAATT
TGATCGTTAATAAAGAATTAGCCGGAGGAGACCCAACTCCACTAAACTGGATTGATCCCACACCATTAGATGAAACAGAT
AACCAAGGAAAAGTTTTAGGAGATCAAATTCTCCGTGTGGGTGAATATTTTACCGTCACTGGTAGTTATAAAGTATTAAA
AATTGATCAACCAAGTAATGGTATTTATGTTCAAATCGGATCTCGTGGAACATGGGTAAATGCTGATAAAGCTAACAAAT
TATAG

Upstream 100 bases:

>100_bases
GTTATTTAATATCAAGTAAAGCCAATTTTTTCAAAATAATCATCTAAAAATAACATTTTTTGTTTCTTGCTTTCGAATAA
TAAGTTACAGGAGGTAATTA

Downstream 100 bases:

>100_bases
TTAACTTATATTTTCTTTTAATAAAAAAATGTGGTTTTAATTAGACCACATTTTTTTATTAATGCCTAAAATGTCTCACA
CCTGTGAAGATCATGGTCAA

Product: putative choline binding protein

Products: NA

Alternate protein names: Surface Antigen; CHAP Domain-Containing Protein; CHAP Domain Family Protein; Autolysin; CHAP Domain Containing Protein

Number of amino acids: Translated: 374; Mature: 374

Protein sequence:

>374_residues
MKKFHRFLVSGVILLGFNGLVPTMPSTLISQQENLVHAAVLGDNYPSKWKKGNGIDSWNMYIRQCTSFAAFRLSSANGFQ
LPKGYGNACTWGHIAKNQGYPVNKTPSIGAIAWFDKNAYQSNAAYGHVAWVADIRGDTVTIEEYNYNAGQGPERYHKRQI
PKSQVSGYIHFKDLSSQTSHSYPRQLKHISQSSFDPSGTYHFTTRLPVKGQTSIDSPDLAYYEAGQSVYYDKIVTAGGYT
WLSYLSFSGNRRYIPIKEPAQSVVQNDNTKPSIKVGDTVTFPGVFRVDQLVNNLIVNKELAGGDPTPLNWIDPTPLDETD
NQGKVLGDQILRVGEYFTVTGSYKVLKIDQPSNGIYVQIGSRGTWVNADKANKL

Sequences:

>Translated_374_residues
MKKFHRFLVSGVILLGFNGLVPTMPSTLISQQENLVHAAVLGDNYPSKWKKGNGIDSWNMYIRQCTSFAAFRLSSANGFQ
LPKGYGNACTWGHIAKNQGYPVNKTPSIGAIAWFDKNAYQSNAAYGHVAWVADIRGDTVTIEEYNYNAGQGPERYHKRQI
PKSQVSGYIHFKDLSSQTSHSYPRQLKHISQSSFDPSGTYHFTTRLPVKGQTSIDSPDLAYYEAGQSVYYDKIVTAGGYT
WLSYLSFSGNRRYIPIKEPAQSVVQNDNTKPSIKVGDTVTFPGVFRVDQLVNNLIVNKELAGGDPTPLNWIDPTPLDETD
NQGKVLGDQILRVGEYFTVTGSYKVLKIDQPSNGIYVQIGSRGTWVNADKANKL
>Mature_374_residues
MKKFHRFLVSGVILLGFNGLVPTMPSTLISQQENLVHAAVLGDNYPSKWKKGNGIDSWNMYIRQCTSFAAFRLSSANGFQ
LPKGYGNACTWGHIAKNQGYPVNKTPSIGAIAWFDKNAYQSNAAYGHVAWVADIRGDTVTIEEYNYNAGQGPERYHKRQI
PKSQVSGYIHFKDLSSQTSHSYPRQLKHISQSSFDPSGTYHFTTRLPVKGQTSIDSPDLAYYEAGQSVYYDKIVTAGGYT
WLSYLSFSGNRRYIPIKEPAQSVVQNDNTKPSIKVGDTVTFPGVFRVDQLVNNLIVNKELAGGDPTPLNWIDPTPLDETD
NQGKVLGDQILRVGEYFTVTGSYKVLKIDQPSNGIYVQIGSRGTWVNADKANKL

Specific function: Unknown

COG id: COG3942

COG function: function code R; Surface antigen

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 41555; Mature: 41555

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: PS50911 CHAP

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKFHRFLVSGVILLGFNGLVPTMPSTLISQQENLVHAAVLGDNYPSKWKKGNGIDSWNM
CCHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHH
YIRQCTSFAAFRLSSANGFQLPKGYGNACTWGHIAKNQGYPVNKTPSIGAIAWFDKNAYQ
HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCC
SNAAYGHVAWVADIRGDTVTIEEYNYNAGQGPERYHKRQIPKSQVSGYIHFKDLSSQTSH
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHCEEEEEECCCCCCCC
SYPRQLKHISQSSFDPSGTYHFTTRLPVKGQTSIDSPDLAYYEAGQSVYYDKIVTAGGYT
CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEHHEEECCCHH
WLSYLSFSGNRRYIPIKEPAQSVVQNDNTKPSIKVGDTVTFPGVFRVDQLVNNLIVNKEL
EEHHEEECCCEEEEECCCHHHHHHHCCCCCCCEEECCEEECCCHHHHHHHHHHHHCCCCC
AGGDPTPLNWIDPTPLDETDNQGKVLGDQILRVGEYFTVTGSYKVLKIDQPSNGIYVQIG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCEEEEEEECCCCCEEEEEC
SRGTWVNADKANKL
CCCCEECCCCCCCC
>Mature Secondary Structure
MKKFHRFLVSGVILLGFNGLVPTMPSTLISQQENLVHAAVLGDNYPSKWKKGNGIDSWNM
CCHHHHHHHHCCCEECCCCCCCCCCHHHHHHHCCEEEEEEECCCCCCCCCCCCCCCHHHH
YIRQCTSFAAFRLSSANGFQLPKGYGNACTWGHIAKNQGYPVNKTPSIGAIAWFDKNAYQ
HHHHHHHHHHEEECCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCC
SNAAYGHVAWVADIRGDTVTIEEYNYNAGQGPERYHKRQIPKSQVSGYIHFKDLSSQTSH
CCCCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHCCCHHHHCEEEEEECCCCCCCC
SYPRQLKHISQSSFDPSGTYHFTTRLPVKGQTSIDSPDLAYYEAGQSVYYDKIVTAGGYT
CHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEECCCCEEEEHHEEECCCHH
WLSYLSFSGNRRYIPIKEPAQSVVQNDNTKPSIKVGDTVTFPGVFRVDQLVNNLIVNKEL
EEHHEEECCCEEEEECCCHHHHHHHCCCCCCCEEECCEEECCCHHHHHHHHHHHHCCCCC
AGGDPTPLNWIDPTPLDETDNQGKVLGDQILRVGEYFTVTGSYKVLKIDQPSNGIYVQIG
CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCEEEEECCEEEEEEECCCCCEEEEEC
SRGTWVNADKANKL
CCCCEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA