Click here to switch to the map view.

The map label for this gene is rsgA [H]

Identifier: 161485754

GI number: 161485754

Start: 219279

End: 220151

Strand: Direct

Name: rsgA [H]

Synonym: SpyM3_0191

Alternate gene names: 161485754

Gene position: 219279-220151 (Clockwise)

Preceding gene: 21909726

Following gene: 21909728

Centisome position: 11.54

GC content: 43.07

Gene sequence:

>873_bases
TTGCAAGGTAAAATCATTAAATCTCTGGCTGGTTTTTATTACGTGGAGTCAGAAGGACAGGTATATCAGACGCGAGCGCG
TGGTAATTTTAGGAAGCGCGGTGAGACACCTTATGTTGGAGATATCGTGGATTTCTCAGCAGAGGACAACTCTGAAGGTT
ATATTTTAGCGATTTATCCTCGTAAAAACAGTTTGGTAAGACCTCCTATCGTCAATATTGACCAAGCAGTGGTTATTATG
TCTGCTAAAGAACCAGAATTTAACAGCAATCTTCTAGACCGCTTTCTCATCTTGCTTGAACACAAAGCCATTCATCCAGT
GGTTTATATTTCTAAGATGGACTTATTAGATAGTCCCGAGGAGATTAAGGCTATTGGTCGACAGTATCAGGCAATCGGTT
ACGATTTTGTGACCAGTCTTGAGGAATTGTTGCCTTTGCTAGCTGATAAAATTACCGTCTTTATGGGACAAACAGGTGTT
GGAAAATCCACCCTTCTCAACCGAATCGCCCCCGAATTGGCTCTTGAAACAGGAGAAATCTCAGATAGTCTAGGGCGTGG
TCGTCACACCACCCGAGCTGTGAGTTTTTACAATACCCATGGCGGAAAAATCGCGGATACGCCAGGTTTCTCATCATTAG
ACTATGATATTGCTAATGCTGAAGATTTGAACGAGGCTTTTCCAGAGCTGCGCCGGCTGAGCCATGAGTGTAAGTTTAGA
TCCTGTACCCATACCCACGAACCCAAGTGTGCTGTTAAGGCAGCGCTTGAAACGGGAGAGTTGTGGCCAGTTCGTTATGA
GCATTACCTGCAATTTCTCAGTGAAATTGAAAACCGTCGTGAAACATATAAAAAAGTTATCAAAAGAAAGTAG

Upstream 100 bases:

>100_bases
TTGACAGTTTTTTAAGGCGAGTGAAACTTAGAGTCAAATGCTGATTTGGGAGCGGTTTTCTGATATAATAGAGTTATTAT
AGTAGGGCAAAGGAGCACAG

Downstream 100 bases:

>100_bases
GTCTACTCCATGTCAACTCTAAAAATTGCCCCATCTATTCTAGCAGCTGATTACGCTAATTTTGCTTCTGAGCTAGCTCG
TATTGAAGAAACAGATGCCG

Product: ribosome-associated GTPase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MQGKIIKSLAGFYYVESEGQVYQTRARGNFRKRGETPYVGDIVDFSAEDNSEGYILAIYPRKNSLVRPPIVNIDQAVVIM
SAKEPEFNSNLLDRFLILLEHKAIHPVVYISKMDLLDSPEEIKAIGRQYQAIGYDFVTSLEELLPLLADKITVFMGQTGV
GKSTLLNRIAPELALETGEISDSLGRGRHTTRAVSFYNTHGGKIADTPGFSSLDYDIANAEDLNEAFPELRRLSHECKFR
SCTHTHEPKCAVKAALETGELWPVRYEHYLQFLSEIENRRETYKKVIKRK

Sequences:

>Translated_290_residues
MQGKIIKSLAGFYYVESEGQVYQTRARGNFRKRGETPYVGDIVDFSAEDNSEGYILAIYPRKNSLVRPPIVNIDQAVVIM
SAKEPEFNSNLLDRFLILLEHKAIHPVVYISKMDLLDSPEEIKAIGRQYQAIGYDFVTSLEELLPLLADKITVFMGQTGV
GKSTLLNRIAPELALETGEISDSLGRGRHTTRAVSFYNTHGGKIADTPGFSSLDYDIANAEDLNEAFPELRRLSHECKFR
SCTHTHEPKCAVKAALETGELWPVRYEHYLQFLSEIENRRETYKKVIKRK
>Mature_290_residues
MQGKIIKSLAGFYYVESEGQVYQTRARGNFRKRGETPYVGDIVDFSAEDNSEGYILAIYPRKNSLVRPPIVNIDQAVVIM
SAKEPEFNSNLLDRFLILLEHKAIHPVVYISKMDLLDSPEEIKAIGRQYQAIGYDFVTSLEELLPLLADKITVFMGQTGV
GKSTLLNRIAPELALETGEISDSLGRGRHTTRAVSFYNTHGGKIADTPGFSSLDYDIANAEDLNEAFPELRRLSHECKFR
SCTHTHEPKCAVKAALETGELWPVRYEHYLQFLSEIENRRETYKKVIKRK

Specific function: May play a role in 30S ribosomal subunit biogenesis. Unusual circulary permuted GTPase that catalyzes rapid hydrolysis of GTP with a slow catalytic turnover [H]

COG id: COG1162

COG function: function code R; Predicted GTPases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 engC GTPase domain [H]

Homologues:

Organism=Escherichia coli, GI87082381, Length=309, Percent_Identity=33.6569579288026, Blast_Score=144, Evalue=7e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010914
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR004881 [H]

Pfam domain/function: PF03193 DUF258 [H]

EC number: NA

Molecular weight: Translated: 32879; Mature: 32879

Theoretical pI: Translated: 6.73; Mature: 6.73

Prosite motif: PS50936 ENGC_GTPASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQGKIIKSLAGFYYVESEGQVYQTRARGNFRKRGETPYVGDIVDFSAEDNSEGYILAIYP
CCCHHHHHHHCEEEECCCCCEEEEHHCCCHHHCCCCCCCCCEEECCCCCCCCCEEEEEEE
RKNSLVRPPIVNIDQAVVIMSAKEPEFNSNLLDRFLILLEHKAIHPVVYISKMDLLDSPE
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCHH
EIKAIGRQYQAIGYDFVTSLEELLPLLADKITVFMGQTGVGKSTLLNRIAPELALETGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCH
SDSLGRGRHTTRAVSFYNTHGGKIADTPGFSSLDYDIANAEDLNEAFPELRRLSHECKFR
HHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
SCTHTHEPKCAVKAALETGELWPVRYEHYLQFLSEIENRRETYKKVIKRK
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MQGKIIKSLAGFYYVESEGQVYQTRARGNFRKRGETPYVGDIVDFSAEDNSEGYILAIYP
CCCHHHHHHHCEEEECCCCCEEEEHHCCCHHHCCCCCCCCCEEECCCCCCCCCEEEEEEE
RKNSLVRPPIVNIDQAVVIMSAKEPEFNSNLLDRFLILLEHKAIHPVVYISKMDLLDSPE
CCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCHH
EIKAIGRQYQAIGYDFVTSLEELLPLLADKITVFMGQTGVGKSTLLNRIAPELALETGEI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCHHHHHHHHHHHHHHCCCCH
SDSLGRGRHTTRAVSFYNTHGGKIADTPGFSSLDYDIANAEDLNEAFPELRRLSHECKFR
HHHHCCCCCHHHEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCC
SCTHTHEPKCAVKAALETGELWPVRYEHYLQFLSEIENRRETYKKVIKRK
CCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: GTP [C]

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11296296 [H]