| Definition | Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome. |
|---|---|
| Accession | NC_004061 |
| Length | 641,454 |
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The map label for this gene is yggX [C]
Identifier: 21672798
GI number: 21672798
Start: 589915
End: 590151
Strand: Direct
Name: yggX [C]
Synonym: BUsg535
Alternate gene names: 21672798
Gene position: 589915-590151 (Clockwise)
Preceding gene: 21672797
Following gene: 21672799
Centisome position: 91.97
GC content: 21.1
Gene sequence:
>237_bases ATGAATCGTATAATTTTTTGTACATTTTTACAAAAAAAATCTGAAGGTCAAGATTATCCTCCTTATCCAGGAAAATTAGG AGAAAAAATATATAATCAAATATCTAAAATTGCTTGGAAGGAATGGAAATTACAGCAAACTAAATTAATTAATGAAGAAA AACTAAATATGTTTAATCAAAATGATAGAAAAAAAATAGAAAAATATATGAAATTATTTCTATTTAATAACGAATAG
Upstream 100 bases:
>100_bases TGGTATGATTTGAAAAACACACACGACATAGGTCTTCCTAAACCAGTTCAAAAAATACTAGAAATATTTAAATAGTTTTT AATAAAAAAGGTTAAAAAAA
Downstream 100 bases:
>100_bases ACACATTTTTCTATATAAATTTAAATTATTAATATAATTTCTTAAAATTATTAGCGTATTAAAAAAGTGCTTATAATCGA TTCTGGTATAGGTGGGCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 78; Mature: 78
Protein sequence:
>78_residues MNRIIFCTFLQKKSEGQDYPPYPGKLGEKIYNQISKIAWKEWKLQQTKLINEEKLNMFNQNDRKKIEKYMKLFLFNNE
Sequences:
>Translated_78_residues MNRIIFCTFLQKKSEGQDYPPYPGKLGEKIYNQISKIAWKEWKLQQTKLINEEKLNMFNQNDRKKIEKYMKLFLFNNE >Mature_78_residues MNRIIFCTFLQKKSEGQDYPPYPGKLGEKIYNQISKIAWKEWKLQQTKLINEEKLNMFNQNDRKKIEKYMKLFLFNNE
Specific function: Could be a mediator in iron transactions between iron acquisition and iron-requiring processes, such as synthesis and/or repair of Fe-S clusters in biosynthetic enzymes
COG id: COG2924
COG function: function code CO; Fe-S cluster protector protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Fe(2+)-trafficking protein family
Homologues:
Organism=Escherichia coli, GI1789332, Length=75, Percent_Identity=60, Blast_Score=97, Evalue=1e-22,
Paralogues:
None
Copy number: 200 Molecules/Cell In: Early Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): FETP_BUCAP (Q8K925)
Other databases:
- EMBL: AE013218 - RefSeq: NP_660865.1 - ProteinModelPortal: Q8K925 - SMR: Q8K925 - EnsemblBacteria: EBBUCT00000000081 - GeneID: 1005647 - GenomeReviews: AE013218_GR - KEGG: bas:BUsg535 - GeneTree: EBGT00050000007967 - HOGENOM: HBG289800 - OMA: SKQTMLI - ProtClustDB: PRK05408 - BioCyc: BAPH198804:BUSG535-MONOMER - HAMAP: MF_00686 - InterPro: IPR007457 - PIRSF: PIRSF029827 - ProDom: PD029191
Pfam domain/function: PF04362 Iron_traffic; SSF111148 Fe_traffick_prot_YggX
EC number: NA
Molecular weight: Translated: 9564; Mature: 9564
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 3.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 3.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNRIIFCTFLQKKSEGQDYPPYPGKLGEKIYNQISKIAWKEWKLQQTKLINEEKLNMFNQ CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC NDRKKIEKYMKLFLFNNE CHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNRIIFCTFLQKKSEGQDYPPYPGKLGEKIYNQISKIAWKEWKLQQTKLINEEKLNMFNQ CCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCC NDRKKIEKYMKLFLFNNE CHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12089438